YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|2130332, gi\|1...
Organism:	Schizosaccharomyces pombe
Length:	92 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2130332, gi|1....

Description	E-value	Query Range	Subject Range
SPAC22G7.11c - conserved fungal protein YAAB_SCHPO - UPF0654 protein C22G7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC22G7.11c PE=...	127.0	[0..1]	[92..49]
gi\|67903306, gi\|... - gi\|67903306\|ref\|XP_681909.1\| hypothetical protein AN8640.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	68.0	[0..35]	[89..33]
gi\|42547252, gi\|... - gi\|46137473\|ref\|XP_390428.1\| hypothetical protein FG10252.1 [Gibberella zeae PH-1], gi\|42547252\|gb\|E...	66.0	[0..35]	[87..31]
gi\|39968307, gi\|... - gi\|39968307\|ref\|XP_365544.1\| hypothetical protein MGG_02246 [Magnaporthe grisea 70-15], gb\|EAA54261....	64.0	[0..35]	[87..31]
gi\|1022346, gi\|2... - gi\|2130428\|pir\|\|S62478 hypothetical protein SPAC4G8.01c - fission yeast (Schizosaccharomyces pombe)...	58.0	[0..1]	[37..49]
gi\|85104300 - gi\|85104300\|ref\|XP_961721.1\| hypothetical protein gi\|32412244, gi\|... - gi\|32412244\|ref\|XP_326602.1\| hypothetical protein ( hypothetical protein 13E11.400 [imported] - Neur...	57.0	[0..50]	[84..29]

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Predicted Domain #1

Region A:
Residues: [1-92]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRDLDYEDL GDYDEDADFD NEEGLNVLGD ESGFVDDPMK TGDLVEEDQL EGKNIENVRG  60
   61 GYKATMHNPN VSKQAKTRAQ RALEEIDDET QA

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits