| Protein: | YL455_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 304 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YL455_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-79 | [1..304] | [1..304] |
|
|
5.0E-60 | [5..290] | [50..350] |
|
|
5.0E-39 | [3..222] | [221..452] |
|
|
1.0E-38 | [4..198] | [5..178] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MTKDIRTGDL VLCKVGSFPP WPAVVFPQRL LRNDVYRKRK SNCVAVCFFN DPTYYWEQPS 60
61 RLKELDQDSI HNFILEHSKN ANQ
|
| Detection Method: |  |
| Confidence: | 22.045757 |
| Match: | 1khcA_ |
| Description: | DNA methyltransferase DNMT3B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.4854263045204 | bayes_pls_golite062009 |
| protein binding | 1.51678357126614 | bayes_pls_golite062009 |
|
Region A: Residues: [84-145] |
1 11 21 31 41 51
| | | | | |
1 RELVNAYKEA KNFDDFNVFL QEKFEEENRL SDLKAFEKSE GSKIVAGEDP FVGRTKVVNK 60
61 RK
|
| Detection Method: | |
| Confidence: | 22.045757 |
| Match: | 1khcA_ |
| Description: | DNA methyltransferase DNMT3B |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [146-242] |
1 11 21 31 41 51
| | | | | |
1 KNSISIKEDP EDNQKSNEEE SKPNIKPSKK KRPTANSGGK SNSGNKKKVK LDYSRRVEIS 60
61 QLFRRRIQRN LIQRETPPTE HEIKETHELL NRIYENS
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.412 | 0.522 | nucleus | a.39.1 | EF-hand |
| View | Download | 0.364 | 0.001 | nucleus | a.156.1 | S13-like H2TH domain |
| View | Download | 0.349 | 0.001 | nucleus | a.91.1 | Regulator of G-protein signalling, RGS |
| View | Download | 0.326 | 0.000 | nucleus | d.199.1 | DNA-binding C-terminal domain of the transcription factor MotA |
| View | Download | 0.342 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.326 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.258 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.247 | N/A | N/A | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.238 | N/A | N/A | d.192.1 | YlxR-like |
| View | Download | 0.212 | N/A | N/A | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.212 | N/A | N/A | a.29.2 | Bromodomain |
| View | Download | 0.205 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.203 | N/A | N/A | d.192.1 | YlxR-like |
| View | Download | 0.201 | N/A | N/A | a.181.1 | Antibiotic binding domain of TipA-like multidrug resistance regulators |
|
Region A: Residues: [243-304] |
1 11 21 31 41 51
| | | | | |
1 DTKRPFFDLK ALRESKLHKL LKAIVNDPDL GEFHPLCKEI LLSWADLITE LKKEKLQALP 60
61 TP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.689 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.760 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.629 | 0.966 | nucleus | a.60.2 | RuvA domain 2-like |
| View | Download | 0.626 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.618 | 0.966 | nucleus | a.159.2 | FF domain |
| View | Download | 0.598 | 0.966 | nucleus | a.64.1 | Saposin |
| View | Download | 0.574 | 0.966 | nucleus | a.2.7 | tRNA-binding arm |
| View | Download | 0.540 | 0.966 | nucleus | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.528 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.517 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.516 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.504 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.487 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.481 | 0.966 | nucleus | a.159.2 | FF domain |
| View | Download | 0.478 | 0.966 | nucleus | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.475 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.459 | 0.966 | nucleus | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.453 | 0.966 | nucleus | a.2.7 | tRNA-binding arm |
| View | Download | 0.413 | 0.966 | nucleus | a.28.3 | Retrovirus capsid protein C-terminal domain |
| View | Download | 0.406 | 0.966 | nucleus | d.39.1 | Dynein light chain 8 (DLC8) |
| View | Download | 0.401 | 0.966 | nucleus | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.375 | 0.966 | nucleus | a.2.7 | tRNA-binding arm |
| View | Download | 0.368 | 0.966 | nucleus | a.85.1 | Hemocyanin, N-terminal domain |
| View | Download | 0.368 | 0.966 | nucleus | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.357 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.355 | 0.966 | nucleus | a.11.1 | Acyl-CoA binding protein |
| View | Download | 0.348 | 0.966 | nucleus | a.2.7 | tRNA-binding arm |
| View | Download | 0.343 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.340 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.335 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.332 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.326 | 0.966 | nucleus | a.3.1 | Cytochrome c |
| View | Download | 0.324 | 0.966 | nucleus | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.321 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.315 | 0.966 | nucleus | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.315 | 0.966 | nucleus | a.153.1 | Nuclear receptor coactivator interlocking domain |
| View | Download | 0.313 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.313 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.312 | 0.966 | nucleus | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.310 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.308 | 0.966 | nucleus | a.118.11 | Cytochrome c oxidase subunit E |
| View | Download | 0.307 | 0.966 | nucleus | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.306 | 0.966 | nucleus | a.4.8 | Ribosomal protein S18 |
| View | Download | 0.297 | 0.966 | nucleus | a.77.1 | DEATH domain |
| View | Download | 0.297 | 0.966 | nucleus | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.293 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.292 | 0.966 | nucleus | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.290 | 0.966 | nucleus | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.289 | 0.966 | nucleus | a.118.8 | TPR-like |
| View | Download | 0.283 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.281 | 0.966 | nucleus | a.39.1 | EF-hand |
| View | Download | 0.278 | 0.966 | nucleus | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.266 | 0.966 | nucleus | a.159.2 | FF domain |
| View | Download | 0.262 | 0.966 | nucleus | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.262 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.258 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.253 | 0.966 | nucleus | a.65.1 | Annexin |
| View | Download | 0.249 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.247 | 0.966 | nucleus | d.58.24 | CheY-binding domain of CheA |
| View | Download | 0.242 | 0.966 | nucleus | a.126.1 | Serum albumin-like |
| View | Download | 0.242 | 0.966 | nucleus | c.15.1 | BRCT domain |
| View | Download | 0.238 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.236 | 0.966 | nucleus | a.108.1 | Ribosomal protein L7/12, oligomerisation (N-terminal) domain |
| View | Download | 0.236 | 0.966 | nucleus | a.4.12 | TrpR-like |
| View | Download | 0.236 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.235 | 0.966 | nucleus | a.60.2 | RuvA domain 2-like |
| View | Download | 0.231 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.230 | 0.966 | nucleus | d.58.8 | Viral DNA-binding domain |
| View | Download | 0.228 | 0.966 | nucleus | a.157.1 | Skp1 dimerisation domain-like |
| View | Download | 0.225 | 0.966 | nucleus | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.225 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.225 | 0.966 | nucleus | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.223 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.223 | 0.966 | nucleus | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.219 | 0.966 | nucleus | a.2.10 | Epsilon subunit of F1F0-ATP synthase C-terminal domain |
| View | Download | 0.219 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.217 | 0.966 | nucleus | d.58.17 | Metal-binding domain |
| View | Download | 0.216 | 0.966 | nucleus | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.216 | 0.966 | nucleus | a.159.2 | FF domain |
| View | Download | 0.215 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.213 | 0.966 | nucleus | a.126.1 | Serum albumin-like |
| View | Download | 0.211 | 0.966 | nucleus | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.211 | 0.966 | nucleus | a.46.2 | Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |
| View | Download | 0.210 | 0.966 | nucleus | a.60.3 | C-terminal domain of RNA polymerase alpha subunit |
| View | Download | 0.208 | 0.966 | nucleus | g.57.1 | Serine proteinase inhibitor lekti |
| View | Download | 0.205 | 0.966 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.205 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.204 | 0.966 | nucleus | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.201 | 0.966 | nucleus | a.118.8 | TPR-like |
| View | Download | 0.201 | 0.966 | nucleus | a.60.1 | SAM/Pointed domain |
