YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|24376234, gi\|...
Organism:	Shewanella oneidensis MR-1
Length:	348 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|24376234, gi|....

Predicted Domain #1

Region A:
Residues: [1-219]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLMTGLIK VDNITRSGLT IYDRIRTGDQ QFWLTSEELS AVLNLRLKGT SFYGLAIRTR  60
   61 SKVAKELVCN ALGYKVPSSF VKCQPRFSGQ MFDTYVQKSN NLQVWNEELD VERRYVIIRT 120
  121 DENDIITQVK VIAGSDLAVL DTTGTLTQKF QARLTLSDQK MELISHFDTL NIQKILAPIS 180
  181 LNLEIDSPVS QPQNGKLLPI GECFRRLSKI VGCSFTDAG

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [220-348]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RTQERNRGAA LHALVCKALG YTDYRDNGQF PDIKHQLLEV KLQTSPTIDL GLVCPNSQAN  60
   61 LDIEQLGLQQ IRHCDVRYAI FYGYIVNGLV HITNLYLTTG EDFFNRFEQF GGKVLNKKIQ 120
  121 IPLPRDFFS