YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30256550, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	208 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30256550, gi|....

Description	E-value	Query Range	Subject Range
gi\|67665704, gi\|... - gi\|67665704\|ref\|ZP_00462964.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia HI2424]... gi\|67093808, gi\|... - gi\|67658720\|ref\|ZP_00456090.1\| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia AU 1054...	5.0E-42	[1..206]	[247..448]
gi\|76581979, gi\|... - gi\|76817506\|ref\|YP_336716.1\| LysE family protein [Burkholderia pseudomallei 1710b], gi\|76581979\|gb\|A...	7.0E-40	[1..199]	[441..628]
gi\|111617741, gi... - gi\|111617741\|ref\|ZP_01404769.1\| Lysine exporter protein (LYSE/YGGA) [Acidovorax avenae subsp. citrul...	3.0E-39	[17..208]	[715..902]
gi\|89152072, gi\|... - gi\|89199797\|ref\|ZP_01178554.1\| Lysine exporter protein (LYSE/YGGA) [Bacillus cereus subsp. cytotoxis...	6.0E-37	[1..208]	[1..207]
gi\|30020423, gi\|... - gi\|30020423\|ref\|NP_832054.1\| amino acid transporter LysE [Bacillus cereus ATCC 14579], gi\|29895974\|g... gi\|228673622, gi... - gi\|229109777\|ref\|ZP_04239362.1\| Homoserine/threonine efflux protein [Bacillus cereus Rock1-15], gi\|2... gi\|228632866, gi... - gi\|229150557\|ref\|ZP_04278772.1\| Homoserine/threonine efflux protein [Bacillus cereus m1550], gi\|2286... gi\|228638652, gi... - gi\|229144930\|ref\|ZP_04273327.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-ST24], gi\|... gi\|228655809, gi... - gi\|229127732\|ref\|ZP_04256721.1\| Homoserine/threonine efflux protein [Bacillus cereus BDRD-Cer4], gi\|... gi\|218235872, gi... - gi\|218235872\|ref\|YP_002367038.1\| putative homoserine/threonine efflux protein [Bacillus cereus B4264...	9.0E-37	[1..208]	[2..208]
gi\|53720860, gi\|... - gi\|53720860\|ref\|YP_109846.1\| putative amino acid transport protein [Burkholderia pseudomallei K96243... gi\|194512458, gi... - gi\|254186314\|ref\|ZP_04892831.1\| translocator protein, LysE family [Burkholderia pseudomallei Pasteur... gi\|194518065, gi... - gi\|254194638\|ref\|ZP_04901069.1\| translocator protein, LysE family [Burkholderia pseudomallei S13], g...	9.0E-37	[1..208]	[33..251]
gi\|65319651 - gi\|65319651\|ref\|ZP_00392610.1\| COG1280: Putative threonine efflux protein [Bacillus anthracis str. A...	1.0E-36	[1..208]	[21..227]
gi\|90411293, gi\|... - gi\|90411293\|ref\|ZP_01219305.1\| hypothetical protein P3TCK_10738 [Photobacterium profundum 3TCK], gi\|...	2.0E-36	[1..208]	[3..210]
gi\|49477632, gi\|... - gi\|49477632\|ref\|YP_036458.1\| homoserine/threonine efflux protein [Bacillus thuringiensis serovar kon... gi\|218903490, gi... - gi\|218903490\|ref\|YP_002451324.1\| putative homoserine/threonine efflux protein [Bacillus cereus AH820... gi\|196029173, gi... - gi\|196039914\|ref\|ZP_03107217.1\| putative homoserine/threonine efflux protein [Bacillus cereus NVH059...	3.0E-36	[1..208]	[2..208]
gi\|254737381 - gi\|254737381\|ref\|ZP_05195085.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|49185203, gi\|... - gi\|49185203\|ref\|YP_028455.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|254722340 - gi\|254722340\|ref\|ZP_05184128.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|47502798, gi\|... - gi\|47527650\|ref\|YP_018999.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|229265739, gi... - gi\|229601331\|ref\|YP_002866693.1\| putative homoserine/threonine efflux protein [Bacillus anthracis st... gi\|30256991, gi\|... - gi\|30262360\|ref\|NP_844737.1\| homoserine/threonine efflux protein, putative [Bacillus anthracis str. ... gi\|227002455, gi... - gi\|227814834\|ref\|YP_002814843.1\| putative homoserine/threonine efflux protein [Bacillus anthracis st... gi\|254760215 - gi\|254760215\|ref\|ZP_05212239.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|254751696 - gi\|254751696\|ref\|ZP_05203733.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|190565699, gi... - gi\|190565699\|ref\|ZP_03018619.1\| putative homoserine/threonine efflux protein [Bacillus anthracis Tsi... gi\|172084637, gi... - gi\|177649563\|ref\|ZP_02932565.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|170128452, gi... - gi\|170706721\|ref\|ZP_02897180.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|167639683, gi... - gi\|167639683\|ref\|ZP_02397953.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str... gi\|165870620, gi... - gi\|165870620\|ref\|ZP_02215274.1\| putative homoserine/threonine efflux protein [Bacillus anthracis str...	4.0E-36	[1..208]	[2..208]

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Predicted Domain #1

Region A:
Residues: [1-208]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENYLLFILT AMLIIIMPGP GFALVTKNTI SYGTNGGIKT VLGTISGMMI HTIMATLGLS  60
   61 AILMKFSMLF IFIKYAGALY LIYLAIKSIK SAFSKKEDMQ VSVEMNAKDI GTIKSFRQGF 120
  121 TTAILNPKTA VFFLSFLPQF IVNNQSHFFQ FLLLGLTFTT LTAIWYLLYI SLIRQLRTFL 180
  181 RKERVNRTIE GITGAVLLVF GVRLFFQK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	39.886057
Match:	PF01810.9
Description:	No description for PF01810.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits