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View Structure Prediction Details

Protein: gi|46912802, gi|...
Organism: Photobacterium profundum SS9
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912802, gi|....

Description E-value Query
Range
Subject
Range
gi|90413241, gi|... - gi|90413241|ref|ZP_01221236.1| cobalamin synthase [Photobacterium profundum 3TCK], gi|90325793|gb|EA...
247.0 [0..1] [278..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHKADSLSN TKNSATDKKL NAIGFKRQWQ VFLVALAFFT RIPIPESTPY SSERLNQANR  60
   61 YFGVVGTIIG LLTAIVYWIS VQVFPIELAV AAAIICGLLL TGAFHEDGLA DVFDGFGGGW 120
  121 SVEQKLNIMK DSRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTYGASALVM MLGCRWAVLI ALAKIDILLP VGLLIVMHTL SRICAASLIF SYPYVRADQD  60
   61 SKVKPLANQQ SQHDLWVLIA TGLIILLLLP LEMAISLTLV LFVVRWLCGK WFQQQLGGYT 120
  121 GDCLGATQQI AELMGYLTLL AWLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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