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View Structure Prediction Details

Protein: gi|46912802, gi|...
Organism: Photobacterium profundum SS9
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912802, gi|....

Description E-value Query
Range
Subject
Range
gi|90413241, gi|... - gi|90413241|ref|ZP_01221236.1| cobalamin synthase [Photobacterium profundum 3TCK], gi|90325793|gb|EA...
247.0 [0..1] [278..1]

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Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHKADSLSN TKNSATDKKL NAIGFKRQWQ VFLVALAFFT RIPIPESTPY SSERLNQANR  60
   61 YFGVVGTIIG LLTAIVYWIS VQVFPIELAV AAAIICGLLL TGAFHEDGLA DVFDGFGGGW 120
  121 SVEQKLNIMK DSRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTYGASALVM MLGCRWAVLI ALAKIDILLP VGLLIVMHTL SRICAASLIF SYPYVRADQD  60
   61 SKVKPLANQQ SQHDLWVLIA TGLIILLLLP LEMAISLTLV LFVVRWLCGK WFQQQLGGYT 120
  121 GDCLGATQQI AELMGYLTLL AWLS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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