| Protein: | ARFG_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 678 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARFG_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
701.0 | [0..9] | [678..3] |
|
|
660.0 | [0..5] | [677..1] |
|
|
659.0 | [0..5] | [670..1] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MAGSVVAAAA AAGGGTGSSC DALYRELWHA CAGPLVTVPR QGELVYYFPQ GHMEQLEAST 60
61 DQQLDQHLPL FNLPSKILCK VVNVELRAET DSDEVYAQIM
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.392 | N/A | N/A | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.369 | N/A | N/A | a.60.8 | HRDC-like |
| View | Download | 0.280 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.264 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.245 | N/A | N/A | d.58.10 | Acylphosphatase-like |
| View | Download | 0.232 | N/A | N/A | d.58.10 | Acylphosphatase-like |
|
Region A: Residues: [101-250] |
1 11 21 31 41 51
| | | | | |
1 LQPEADQNEL TSPKPEPHEP EKCNVHSFCK TLTASDTSTH GGFSVLRRHA EECLPPLDMT 60
61 QNPPWQELVA RDLHGNEWHF RHIFRGQPRR HLLTTGWSVF VSSKRLVAGD AFIFLRGENG 120
121 ELRVGVRRLM RQLNNMPSSV ISSHSMHLGV
|
| Detection Method: | |
| Confidence: | 34.30103 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [251-366] |
1 11 21 31 41 51
| | | | | |
1 LATASHAIST GTLFSVFYKP RTSQSEFVVS ANKYLEAKNS KISVGMRFKM RFEGDEAPER 60
61 RFSGTIIGVG SMSTSPWANS DWRSLKVQWD EPSVVPRPDR VSPWELEPLA VSNSQP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [367-510] |
1 11 21 31 41 51
| | | | | |
1 SPQPPARNKR ARPPASNSIA PELPPVFGLW KSSAESTQGF SFSGLQRTQE LYPSSPNPIF 60
61 STSLNVGFST KNEPSALSNK HFYWPMRETR ANSYSASISK VPSEKKQEPS SAGCRLFGIE 120
121 ISSAVEATSP LAAVSGVGQD QPAA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [511-678] |
1 11 21 31 41 51
| | | | | |
1 SVDAESDQLS QPSHANKSDA PAASSEPSPH ETQSRQVRSC TKVIMQGMAV GRAVDLTRLH 60
61 GYDDLRCKLE EMFDIQGELS ASLKKWKVVY TDDEDDMMLV GDDPWPEFCS MVKRIYIYTY 120
121 EEAKQLTPKS KLPIIGDAIK PNPNKQSPES DMPHSDLDST APVTDKDC
|
| Detection Method: | |
| Confidence: | 1.19 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
