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Protein Overview: gi|30696352

General Information:
Name(s) found: gi|30696352 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30696352|ref|NP_849830.1| ARF1 (AUXIN RESPONSE FACTOR 1); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 662 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASNHSSGK PGGVLSDALC RELWHACAGP LVTLPREGER VYYFPEGHME QLEASMHQGL  60
   61 EQQMPSFNLP SKILCKVINI QRRAEPETDE VYAQITLLPE LDQSEPTSPD APVQEPEKCT 120
  121 VHSFCKTLTA SDTSTHGGFS VLRRHADDCL PPLDMSQQPP WQELVATDLH NSEWHFRHIF 180
  181 RGQPRRHLLT TGWSVFVSSK KLVAGDAFIF LRGENEELRV GVRRHMRQQT NIPSSVISSH 240
  241 SMHIGVLATA AHAITTGTIF SVFYKPRTSR SEFIVSVNRY LEAKTQKLSV GMRFKMRFEG 300
  301 EEAPEKRFSG TIVGVQENKS SVWHDSEWRS LKVQWDEPSS VFRPERVSPW ELEPLVANST 360
  361 PSSQPQPPQR NKRPRPPGLP SPATGPSGPD GVWKSPADTP SSVPLFSPPA KAATFGHGGN 420
  421 KSFGVSIGSA FWPTNADSAA ESFASAFNNE STEKKQTNGN VCRLFGFELV ENVNVDECFS 480
  481 AASVSGAVAV DQPVPSNEFD SGQQSEPLNI NQSDIPSGSG DPEKSSLRSP QESQSRQIRS 540
  541 CTKVHMQGSA VGRAIDLTRS ECYEDLFKKL EEMFDIKGEL LESTKKWQVV YTDDEDDMMM 600
  601 VGDDPWNEFC GMVRKIFIYT PEEVKKLSPK NKLAVNARMQ LKADAEENGN TEGRSSSMAG 660
  661 SR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] MSA 1.075982 View MSA. No confident structure predictions are available.
    2 View Details [99..236] PSI-BLAST 34.221849 Solution Structure of the B3 DNA-Binding Domain of RAV1
    3 View Details [237..399] MSA 2.125989 View MSA. No confident structure predictions are available.
    4 View Details [400..476] deduced N/A No confident structure predictions are available.
    5 View Details [477..662] FFAS03 1.1 Bud emergence mediator Bemp1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.49

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle