| Protein: | gi|30696352 |
| Organism: | Arabidopsis thaliana |
| Length: | 662 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30696352.
| Description | E-value | Query Range |
Subject Range |
|
|
722.0 | [0..1] | [662..1] |
|
|
645.0 | [0..1] | [656..1] |
|
|
627.0 | [0..17] | [658..21] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MAASNHSSGK PGGVLSDALC RELWHACAGP LVTLPREGER VYYFPEGHME QLEASMHQGL 60
61 EQQMPSFNLP SKILCKVINI QRRAEPETDE VYAQITLL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-236] |
1 11 21 31 41 51
| | | | | |
1 PELDQSEPTS PDAPVQEPEK CTVHSFCKTL TASDTSTHGG FSVLRRHADD CLPPLDMSQQ 60
61 PPWQELVATD LHNSEWHFRH IFRGQPRRHL LTTGWSVFVS SKKLVAGDAF IFLRGENEEL 120
121 RVGVRRHMRQ QTNIPSSV
|
| Detection Method: | |
| Confidence: | 34.221849 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [237-399] |
1 11 21 31 41 51
| | | | | |
1 ISSHSMHIGV LATAAHAITT GTIFSVFYKP RTSRSEFIVS VNRYLEAKTQ KLSVGMRFKM 60
61 RFEGEEAPEK RFSGTIVGVQ ENKSSVWHDS EWRSLKVQWD EPSSVFRPER VSPWELEPLV 120
121 ANSTPSSQPQ PPQRNKRPRP PGLPSPATGP SGPDGVWKSP ADT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [400-476] |
1 11 21 31 41 51
| | | | | |
1 PSSVPLFSPP AKAATFGHGG NKSFGVSIGS AFWPTNADSA AESFASAFNN ESTEKKQTNG 60
61 NVCRLFGFEL VENVNVD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [477-662] |
1 11 21 31 41 51
| | | | | |
1 ECFSAASVSG AVAVDQPVPS NEFDSGQQSE PLNINQSDIP SGSGDPEKSS LRSPQESQSR 60
61 QIRSCTKVHM QGSAVGRAID LTRSECYEDL FKKLEEMFDI KGELLESTKK WQVVYTDDED 120
121 DMMMVGDDPW NEFCGMVRKI FIYTPEEVKK LSPKNKLAVN ARMQLKADAE ENGNTEGRSS 180
181 SMAGSR
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 1ip9A |
| Description: | Bud emergence mediator Bemp1 |
Matching Structure (courtesy of the PDB): |
|
