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View Structure Prediction Details

Protein: CSTR5_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSTR5_ORYSJ.

Description E-value Query
Range
Subject
Range
CSTR4_ORYSI - CMP-sialic acid transporter 4 OS=Oryza sativa subsp. indica GN=CSTLP4 PE=3 SV=1
192.0 [0..1] [404..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNGVVECS VCRSRLVVPS PRSVSRAYDK HRSKISSKFR ALNVLLVVGD CILVGLQPIL  60
   61 VFMSKVDGKF QFSPISVNFL TEVTKVVFAI VMLIIQSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQKVGEKPLL ARSTFIQAAR NNALLAVPAL LYAINNYLKF IMQLYFNPST VKMLSNLKVL  60
   61 VIAVLLKFIM KRRFSVIQWE ALALLLIGIS INQLRTVPAG NTAFGLPVTA IAYIYTLIFV 120
  121 TVPSLASVYN EYALKSQYDT SIYLQNLFLY GYGAIFNFLG ILGTALFQGP ESFNILR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.7
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [276-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHSRATMFLI CNNAAQGILS SFFFKYADTI LKKYSSTVAT IFTGLASAAF LGHTLTINFL  60
   61 LGISVVFISM HQFFSPLAKA KDDKPAELLE LEDTQNHRSS ESSFVNMTAG AAEDASHRIG 120
  121 TDERQPLLPT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle