| Protein: | AP5M_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 613 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP5M_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
482.0 | [0..4] | [612..5] |
|
Region A: Residues: [1-238] |
1 11 21 31 41 51
| | | | | |
1 MPSGCSIRAL WIINNQDTVV FSRRFPVVEK QWCSAYKTEN ENTGLDLPRL PTDQQISDSF 60
61 TRRKRREGST RGYGIRVAQS TKGSDSWVDD PITRHIISLC LTEEDDDDDD ERNILWPIAL 120
121 HTKALYSILV LPLVEPKEMK DYVKLCRRSD CGPAVGEDLS LSSLLLNISS ITGAFMVAHA 180
181 FGDIISGDTV EPEVVVSVSP SVGGLFDSLT GSIGISSRAK PVAAPVASSN PSGAAITG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [239-613] |
1 11 21 31 41 51
| | | | | |
1 ATASDAPKAG SRLLDRDLLR NFIATAMPFG TPLDLSLSNI SAMKANGFSS ADPPPQELKQ 60
61 PAWKPYLYKG KQRLLFTIHE TVSAAMYDRD EIPDNVSVAG QINCRAELEG LPDVSFPLAG 120
121 LSTAHIEAIS FHPCAQVPAH GIDKQNIVFQ PPLGNFVLMR YQAGCGLGPP VKGFYQLSMV 180
181 SEDEGAFLFK VHLMEGYKAP LSMEFCTITM PFPRRRIVAF DGTPSAGTVL TTEHSVEWRI 240
241 LGSGRSLSGK SLEATFPGTI KFSPLQSRRK GDGDDEESED ESAENVVNVE DFLVQKMNKD 300
301 LPAAELEEPF CWQAYDYAKV SFKIVGASVS RMSIDTKSVN IYPTTKSPVE FSAQVTSGDY 360
361 ILWNTLGKAP SAAVV
|
| Detection Method: | |
| Confidence: | 113.0 |
| Match: | 1w63M |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
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