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View Structure Prediction Details

Protein: GET2
Organism: Saccharomyces cerevisiae
Length: 307 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GET2.

Description E-value Query
Range
Subject
Range
SIF1_SCHPO - Sad1-interacting factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sif1 PE=1 SV=1
sif1 - Sad1 interacting factor 1
0.002 [27..103] [3..82]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWICTNELF HVCSISNVAL GNMSELTEAE KRRLLRERRQ KKFSNGGASS RLNKITGQAS  60
   61 SHLNAESPLD APSAAKTTPP ASVHSATPDI KEDSNVAPQL DLLKQLAAMQ GQGTGKSTPQ 120
  121 DSSTPDLLSL LSSMNTGMPS AEGTPSFGQA APAAPINQAA LDYHDYLLNR LKAWTILVKW 180
  181 VFFLLPYLYL ITRPNSSVWP AYAFTQSAWF APLRNPSNFT RIFATFEFLS ISIYYQLLKN 240
  241 VEHKSKIKNL QDTNKLVKLV SLVPEGVIPV ANLKGKLITL LQYWDLLSML ITDISFVLIV 300
  301 LGLLTYL

[Run NCBI BLAST on this sequence.]

Detection Method: ORFEUS
Confidence: 7.05
Match: 1llwA
Description: Alpha subunit of glutamate synthase, C-terminal domain; Alpha subunit of glutamate synthase, central and FMN domains; Alpha subunit of glutamate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle