| Protein: | SEC9 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 651 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SEC9.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..651] | [1..651] |
|
|
3.0E-55 | [189..648] | [936..1383] |
|
|
2.0E-52 | [189..550] | [931..1287] |
|
|
6.0E-49 | [126..648] | [845..1375] |
|
|
2.0E-48 | [189..648] | [923..1370] |
|
|
2.0E-48 | [178..648] | [920..1378] |
|
|
4.0E-48 | [221..648] | [960..1376] |
|
|
7.0E-48 | [189..648] | [932..1379] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MGLKKFFKIK PPEEATPEQN KDTLMELGIS VKNPSKKRKE KFAAYGKFAN DKAEDKVYAP 60
61 PGYEQYARPQ DELEDLNASP LDANANEATA GSNRGSSGTQ DLGNGAESNS MQDPYAIEND 120
121 DYRYDDDPYA RFQANKSNGR GSVNAAPYGD YGGGYNGTSL NSYNNDGPYS NQNTSNSWVN 180
181 ANGRNSLNHS NSTLNVGPSR QTRQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [205-302] |
1 11 21 31 41 51
| | | | | |
1 PPVSTSTNSL SLDQRSPLAN PMQEKRNPYA DMNSYGGAYD SNTNRSSGTR QGSSKNANPY 60
61 ASMANDSYSN GNLNRSANPY SSRSVRQPQS QQAPMTYT
|
| Detection Method: | |
| Confidence: | 3.0 |
| Match: | 1bg1A_ |
| Description: | STAT3b |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [303-651] |
1 11 21 31 41 51
| | | | | |
1 PSFIASDEAA RNSEVDLNEE PRTGEFDFEE VYADKSAENR AALDEPDLNA VMTNEDSIDL 60
61 NASEVDHSSR QQQQQQWFMD EQQQQQQHFN ATNNQYGDQR GYKTFEEIQK EEEARQQQEE 120
121 DEAVDEIKQE IKFTKQSSVA STRNTLKMAQ DAERAGMNTL GMLGHQSEQL NNVEGNLDLM 180
181 KVQNKVADEK VAELKKLNRS ILAVHVSNPF NSKRRRRERE EQLKNRKIEE KLMREQTSQQ 240
241 LSQSTQRIEG AMNANNNISE VRERYQRKNV LEKAKRYQFE NDEEDDEMEL EIDRNLDQIQ 300
301 QVSNRLKKMA LTTGKELDSQ QKRLNNIEES TDDLDINLHM NTNRLAGIR
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
