| Protein: | CLB6 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 380 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLB6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [2..373] | [39..408] |
|
|
0.0 | [2..373] | [39..408] |
|
|
0.0 | [11..372] | [21..375] |
|
|
0.0 | [9..373] | [77..434] |
|
|
0.0 | [11..372] | [21..377] |
|
|
0.0 | [14..373] | [87..440] |
|
|
0.0 | [2..372] | [15..380] |
|
|
0.0 | [2..372] | [15..380] |
|
Region A: Residues: [1-91] |
1 11 21 31 41 51
| | | | | |
1 MNCIPSPISE RKIQINNEDC IGKENAFHTI PRESSINLTP HSTNEKKVLS EVNSNKIDSL 60
61 QLPRGKLQRD STHLEKTRKR QLSNDSTDPI E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.223 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.224 | a.24.11 | Bacterial GAP domain |
| View | Download | 0.440 | a.7.8 | GAT domain |
| View | Download | 0.289 | g.53.1 | TAZ domain |
| View | Download | 0.288 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.258 | a.4.12 | TrpR-like |
| View | Download | 0.242 | a.3.1 | Cytochrome c |
| View | Download | 0.210 | g.53.1 | TAZ domain |
|
Region A: Residues: [92-130] |
1 11 21 31 41 51
| | | | | |
1 PKTVKKIKCH QWKNLDSIEM DDPFMVAEYT DSIFSHLYE
|
|
Region B: Residues: [256-380] |
1 11 21 31 41 51
| | | | | |
1 PLNFIRRISK ADNYCIETRN MAKFIMEYSI CCNKFIHLKP SYLAAMSMYI ARKIKNENSK 60
61 WDETFIHYSG GIDIESDPAF KDFISELVED IAVPDTNLDS LRLKYKKPKH GMVYFKVFDW 120
121 CKQKR
|
| Detection Method: | |
| Confidence: | 328.855515 |
| Match: | 1vin__ |
| Description: | Cyclin A |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [131-255] |
1 11 21 31 41 51
| | | | | |
1 KEIQMLPTHN YLMDTQSPYH LKSSMRALLI DWLVEVHEKF HCLPETLFLA INLLDRFLSQ 60
61 NVVKLNKLQL LCITCLFIAC KFEEVKLPKI TNFAYVTDGA ATVEGIRKAE LFVLSSLGYN 120
121 ISLPN
|
| Detection Method: | |
| Confidence: | 328.855515 |
| Match: | 1vin__ |
| Description: | Cyclin A |
| Matching Structure (courtesy of the PDB): |
|
