Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YKL222C.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..705] | [1..705] |
|
|
5.0E-77 | [1..480] | [1..490] |
|
|
7.0E-75 | [1..480] | [1..492] |
|
|
9.0E-74 | [1..480] | [1..493] |
|
|
5.0E-72 | [1..480] | [1..487] |
|
|
4.0E-69 | [5..563] | [20..603] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MKNTELSQKK KLDRQSRRKP AKSCHFCRVR KLKCDRVRPF CGSCSSRNRK QCEYKENTSA 60
61 MEDQLRKKYR RCSKLEMARR IEELESQLTK QSQPN
|
| Detection Method: |  |
| Confidence: | 54.94696 |
| Match: | 1hwtD_ |
| Description: | Hap1 (Cyp1); HAP1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 4.56444258780502 | bayes_pls_golite062009 |
| DNA binding | 4.26146437716972 | bayes_pls_golite062009 |
| nucleic acid binding | 4.17369933547911 | bayes_pls_golite062009 |
| transcription factor activity | 3.049435548132 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 2.98081393153291 | bayes_pls_golite062009 |
| RNA polymerase II transcription factor activity | 2.93914501897006 | bayes_pls_golite062009 |
| binding | 2.91929847152301 | bayes_pls_golite062009 |
| specific RNA polymerase II transcription factor activity | 2.44382866473054 | bayes_pls_golite062009 |
| transcription activator activity | 2.24483536326713 | bayes_pls_golite062009 |
|
Region A: Residues: [96-208] |
1 11 21 31 41 51
| | | | | |
1 IHEGQNPLSN MRYLSSKHNR HILYGPTSYR AILATQTDTF AKYREEIWQV LKLSRNNWKR 60
61 EHHYSTLSEI SSIETAPPHS GSPSVIEYLC ESLPNYEVLC EYLTDFFASD FYD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [209-452] |
1 11 21 31 41 51
| | | | | |
1 SYQIVHKEKV LRDLQDCFVK GPRSHKTGQH TIISLNLDSK KNYYKVGVMT AIMCLASHPK 60
61 EVPEAIEVFH KVLTSFVSAK VFYTERVQFL FLRYLYINVA GLDGGDQSHC IFIHGLTIDT 120
121 AIHMGLNEDL RRLYLSKNHP IEEIPYLERL WLWILFTDVK ISLSTGIPVR INDDFVNKVR 180
181 LENYSSSGDI LLYKTTLRLR NIMKQIHARE KPPDIPLIIE DLKKFTIKMF KPLDFYLNAS 240
241 NLNG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [453-518] |
1 11 21 31 41 51
| | | | | |
1 NEFTELQLWH ATLHMIGSLS NLYTLTHQDF DARIFNFSVL APLNSLHLCF NVLETYFELD 60
61 NSKLSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [519-705] |
1 11 21 31 41 51
| | | | | |
1 KSLCLSKKWP HLNNALFLIY VNAFRALIQI YTIFLQYMEN KDIQLFIQRN SSALTYSICP 60
61 GDFEGPHNKC ISLKIAFKEM ENIFDHIHQE KLKPLTQIWQ NSYYFSIIIS MEKIGRRAFN 120
121 KGMKNIDEGP ETENDATENS LTTILNDLEG PLEDFSENFI DDILGSPSAF FDTAISGWSN 180
181 FEDFFSR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
