| Protein: | YPS3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 508 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YPS3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..508] | [1..508] |
|
|
0.0 | [1..396] | [1..379] |
|
|
0.0 | [1..396] | [1..379] |
|
Region A: Residues: [1-64] |
1 11 21 31 41 51
| | | | | |
1 MKLQLAAVAT LAVLTSPAFG RVLPDGKYVK IPFTKKKNGD NGELSKRSNG HEKFVLANEQ 60
61 SFYS
|
|
Region B: Residues: [208-244] |
1 11 21 31 41 51
| | | | | |
1 DATAYSLFLN DESQSSGSIL FGAVDHSKYE GQLYTIP
|
|
Region C: Residues: [379-433] |
1 11 21 31 41 51
| | | | | |
1 NAYVVYDLDN YEISLAQAKY GTGKENVEVI KSTVPSAIRA PSYNNTWSNY ASATS
|
| Detection Method: |  |
| Confidence: | 918.68867 |
| Match: | 1ypsA_ |
| Description: | No description for 1ypsA_ was found. |
| Term | Confidence | Notes |
| aspartic-type endopeptidase activity | 7.9145950161796 | bayes_pls_golite062009 |
| aspartic-type peptidase activity | 7.9145950161796 | bayes_pls_golite062009 |
| peptidase activity | 5.78181196721293 | bayes_pls_golite062009 |
| endopeptidase activity | 5.4888481808613 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 5.39972232367526 | bayes_pls_golite062009 |
| hydrolase activity | 4.34796304893506 | bayes_pls_golite062009 |
| catalytic activity | 1.54514410489082 | bayes_pls_golite062009 |
| binding | 1.10054369202721 | bayes_pls_golite062009 |
| receptor binding | 0.561225023505917 | bayes_pls_golite062009 |
| protein binding | 0.193907750061394 | bayes_pls_golite062009 |
|
Region A: Residues: [65-207] |
1 11 21 31 41 51
| | | | | |
1 VELAIGTPSQ NLTVLLDTGS ADLWVPGKGN PYCGSVMDCD QYGVFDKTKS STFKANKSSP 60
61 FYAAYGDGTY AEGAFGQDKL KYNELDLSGL SFAVANESNS TFGVLGIGLS TLEVTYSGKV 120
121 AIMDKRSYEY DNFPLFLKHS GAI
|
|
Region B: Residues: [245-378] |
1 11 21 31 41 51
| | | | | |
1 LVNLYKSQGY QHPVAFDVTL QGLGLQTDKR NITLTTTKLP ALLDSGTTLT YLPSQAVALL 60
61 AKSLNASYSK TLGYYEYTCP SSDNKTSVAF DFGGFRINAP LSDFTMQTSV GTCVLAIIPQ 120
121 AGNATAILGD SFLR
|
| Detection Method: | |
| Confidence: | 918.68867 |
| Match: | 1ypsA_ |
| Description: | No description for 1ypsA_ was found. |
|
Region A: Residues: [434-508] |
1 11 21 31 41 51
| | | | | |
1 GGNIFTTVRT FNGTSTATTT RSTTTKKTNS TTTAKSTHKS KRALQRAATN SASSIRSTLG 60
61 LLLVPSLLIL SVFFS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
