| Protein: | gi|5823166, gi|2... |
| Organism: | Homo sapiens |
| Length: | 770 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|5823166, gi|2....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..770] | [1..771] |
|
|
0.0 | [1..770] | [1..833] |
|
|
0.0 | [1..770] | [1..776] |
|
|
0.0 | [1..770] | [194..1046] |
|
|
0.0 | [1..770] | [1..776] |
|
|
0.0 | [1..752] | [1..763] |
|
Region A: Residues: [1-197] |
1 11 21 31 41 51
| | | | | |
1 MKGDTRHLNG EEDAGGREDS ILVNGACSDQ SSDSPPILEA IRTPEIRGRR SSSRLSKREV 60
61 SSLLSYTQDL TGDGDGEDGD GSDTPVMPKL FRETRTRSES PAVRTRNNNS VSSRERHRPS 120
121 PRSTRGRQGR NHVDESPVEF PATRSLRRRA TASAGTPWPS PPSSYLTIDL TDDTEDTHGT 180
181 PQSSSTPYAR LAQDSQQ
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [198-387] |
1 11 21 31 41 51
| | | | | |
1 GGMESPQVEA DSGDGDSSEY QDGKEFGIGD LVWGKIKGFS WWPAMVVSWK ATSKRQAMSG 60
61 MRWVQWFGDG KFSEVSADKL VALGLFSQHF NLATFNKLVS YRKAMYHALE KARVRAGKTF 120
121 PSSPGDSLED QLKPMLEWAH GGFKPTGIEG LKPNNTQPEN KTRRRTADDS ATSDYCPAPK 180
181 RLKTNCYNNG
|
| Detection Method: | |
| Confidence: | 27.154902 |
| Match: | 1khcA |
| Description: | DNA methyltransferase DNMT3B |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates | 7.32955324136098 | bayes_pls_golite062009 |
| DNA (cytosine-5-)-methyltransferase activity | 5.05440120599055 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 4.57248514274229 | bayes_pls_golite062009 |
| methylated histone residue binding | 3.99360930536438 | bayes_pls_golite062009 |
| histone methyltransferase activity | 3.58146193288239 | bayes_pls_golite062009 |
| transcription regulator activity | 3.34067645460735 | bayes_pls_golite062009 |
| unmethylated CpG binding | 3.31276815221906 | bayes_pls_golite062009 |
| transcription repressor activity | 3.21000367413295 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.0892691305178 | bayes_pls_golite062009 |
| binding | 3.03932294945523 | bayes_pls_golite062009 |
| protein binding | 2.81959915474598 | bayes_pls_golite062009 |
| histone binding | 2.53075587257882 | bayes_pls_golite062009 |
| protein-lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| histone-lysine N-methyltransferase activity | 2.42481282100188 | bayes_pls_golite062009 |
| nucleic acid binding | 2.39870293911569 | bayes_pls_golite062009 |
| DNA binding | 2.38812251097879 | bayes_pls_golite062009 |
| N-methyltransferase activity | 2.35081504375623 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 2.18489564426455 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.65392797012899 | bayes_pls_golite062009 |
| transcription factor binding | 1.49481919243505 | bayes_pls_golite062009 |
| methyltransferase activity | 1.45012620929102 | bayes_pls_golite062009 |
| transcription factor activity | 1.41108699101741 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 1.37282797213354 | bayes_pls_golite062009 |
| transcription cofactor activity | 1.36802409360413 | bayes_pls_golite062009 |
| fibroblast growth factor binding | 1.0676043856778 | bayes_pls_golite062009 |
| chromatin binding | 0.8915883636553 | bayes_pls_golite062009 |
| histone methyltransferase activity (H3-K36 specific) | 0.668498662418847 | bayes_pls_golite062009 |
| transferase activity | 0.624822344512503 | bayes_pls_golite062009 |
| retinoid X receptor binding | 0.56323697625529 | bayes_pls_golite062009 |
| retinoic acid receptor binding | 0.52209845652926 | bayes_pls_golite062009 |
| transcription activator activity | 0.262486595331603 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-K20 specific) | 0.227288548958153 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.141502107934206 | bayes_pls_golite062009 |
|
Region A: Residues: [388-770] |
1 11 21 31 41 51
| | | | | |
1 KDRGDEDQSR EQMASDVANN KSSLEDGCLS CGRKNPVSFH PLFEGGLCQT CRDRFLELFY 60
61 MYDDDGYQSY CTVCCEGREL LLCSNTSCCR CFCVECLEVL VGTGTAAEAK LQEPWSCYMC 120
121 LPQRCHGVLR RRKDWNVRLQ AFFTSDTGLE YEAPKLYPAI PAARRRPIRV LSLFDGIATG 180
181 YLVLKELGIK VGKYVASEVC EESIAVGTVK HEGNIKYVND VRNITKKNIE EWGPFDLVIG 240
241 GSPCNDLSNV NPARKGLYEG TGRLFFEFYH LLNYSRPKEG DDRPFFWMFE NVVAMKVGDK 300
301 RDISRFLECN PVMIDAIKVS AAHRARYFWG NLPGMNRIFG FPVHYTDVSN MGRGARQKLL 360
361 GRSWSVPVIR HLFAPLKDYF ACE
|
| Detection Method: | |
| Confidence: | 77.154902 |
| Match: | 2pv0B |
| Description: | No description for 2pv0B was found. |
