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View Structure Prediction Details

Protein: gi|110289135
Organism: Oryza sativa Japonica Group
Length: 902 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|110289135.

Predicted Domain #1
Region A:
Residues: [1-902]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEADDAPPP WRPSKPAAAI DGSSGPLAAA AARLSGRSRA LPSSRDFHFY NNFPSFRSPV  60
   61 GAAAARAGAS LAALGAAPFY PKRHPPFPGD DLDDAQDWVV GVIDDLAEQF GASMDEFKAA 120
  121 REEEEATGRR ATEEDGFQVV YGKKKKKVMG GGGGEEGVGR GGEAFGGGSG SVKMATRDKS 180
  181 AAPGAKAKVP FHIPTIPRPQ DVHRILVDNS SKPFEHSWLE KSDDGSRVVH PLEKIPMEQL 240
  241 VDRDFPESEP IKPPALDDTP FTHVEDLKSL EVLATKLKSA TEFAVDLEHN HYRSFQGLTC 300
  301 LMQISTRTED FIVDTLKLRK YLGDYLREIF KDPTKKKVMH GADRDIIWLQ RDFGIYVCNL 360
  361 FDTGQASRIL QMDRNSLEHL LHHFCGVTAN KEYQSADWRL RPLPDEMIKY AREDTHYLLY 420
  421 IYDLMRLRLV KESSDENDLL LEVYKRSKEI CLQLYEKELL THSSYLYIHG LKENEFDARQ 480
  481 LSVLANIYKW RDSVARGEDE STGYILPNKT LLEIAKQMPA TTGRLKRIVK SKNSYLERHL 540
  541 GHVISTIRSA IANCDAFESI AEQLKKGRLE ELAVANMKSN DGDTEMVPAD DGNNDDDNVG 600
  601 PSDEHGAVAS VENVGAASHC TGNVTSGASS VNVQLENPAE TKSLGILSGV SGQDMEVLSN 660
  661 GDRKQVAKAT VQVSKRPTAF GALLGKPTSG RRQNLFSGFS SGQNMVDKIK SSVALPFHNF 720
  721 CGGAKSPATS IPLEESVRPE PESIQYSDPA CQTEDVIQLG TETDGPQPPE NHNKDGQGHL 780
  781 VPDDMEMSRS PPEHSSAGAK QRFQSLIESR NQQQNHKPHQ EPEFNHQLKP FDYAEARKNI 840
  841 TFGERKAERI KDNAVARAIN KDSGDKGRTS NQFGAGENEG NRQNPRGRQA FPPSGNRSAT 900
  901 YH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 148.0
Match: 1bgxT
Description: 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle