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Protein Overview: gi|110289135

General Information:
Name(s) found: gi|110289135 [NCBI NR]
Description(s) found:
Found 2 descriptions.
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  • gi|110289135|gb|AAP53938.2| Nucleolar protein, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 902 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEADDAPPP WRPSKPAAAI DGSSGPLAAA AARLSGRSRA LPSSRDFHFY NNFPSFRSPV  60
   61 GAAAARAGAS LAALGAAPFY PKRHPPFPGD DLDDAQDWVV GVIDDLAEQF GASMDEFKAA 120
  121 REEEEATGRR ATEEDGFQVV YGKKKKKVMG GGGGEEGVGR GGEAFGGGSG SVKMATRDKS 180
  181 AAPGAKAKVP FHIPTIPRPQ DVHRILVDNS SKPFEHSWLE KSDDGSRVVH PLEKIPMEQL 240
  241 VDRDFPESEP IKPPALDDTP FTHVEDLKSL EVLATKLKSA TEFAVDLEHN HYRSFQGLTC 300
  301 LMQISTRTED FIVDTLKLRK YLGDYLREIF KDPTKKKVMH GADRDIIWLQ RDFGIYVCNL 360
  361 FDTGQASRIL QMDRNSLEHL LHHFCGVTAN KEYQSADWRL RPLPDEMIKY AREDTHYLLY 420
  421 IYDLMRLRLV KESSDENDLL LEVYKRSKEI CLQLYEKELL THSSYLYIHG LKENEFDARQ 480
  481 LSVLANIYKW RDSVARGEDE STGYILPNKT LLEIAKQMPA TTGRLKRIVK SKNSYLERHL 540
  541 GHVISTIRSA IANCDAFESI AEQLKKGRLE ELAVANMKSN DGDTEMVPAD DGNNDDDNVG 600
  601 PSDEHGAVAS VENVGAASHC TGNVTSGASS VNVQLENPAE TKSLGILSGV SGQDMEVLSN 660
  661 GDRKQVAKAT VQVSKRPTAF GALLGKPTSG RRQNLFSGFS SGQNMVDKIK SSVALPFHNF 720
  721 CGGAKSPATS IPLEESVRPE PESIQYSDPA CQTEDVIQLG TETDGPQPPE NHNKDGQGHL 780
  781 VPDDMEMSRS PPEHSSAGAK QRFQSLIESR NQQQNHKPHQ EPEFNHQLKP FDYAEARKNI 840
  841 TFGERKAERI KDNAVARAIN KDSGDKGRTS NQFGAGENEG NRQNPRGRQA FPPSGNRSAT 900
  901 YH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..902] PSI-BLAST 148.0 5' to 3' exonuclease domain of DNA polymerase Taq; Exonuclease domain of prokaryotic DNA polymerase; DNA polymerase I (Klenow fragment)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle