| Protein: | YIFC_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 996 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YIFC_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
506.0 | [0..6] | [990..135] |
|
|
499.0 | [0..4] | [994..24] |
|
|
497.0 | [0..42] | [980..61] |
|
|
492.0 | [0..8] | [990..153] |
|
|
489.0 | [0..8] | [987..457] |
|
|
486.0 | [0..8] | [971..27] |
|
|
482.0 | [0..35] | [969..63] |
|
|
481.0 | [0..8] | [990..26] |
|
|
471.0 | [0..46] | [994..211] |
|
|
456.0 | [0..51] | [953..71] |
|
Region A: Residues: [1-374] |
1 11 21 31 41 51
| | | | | |
1 MSIKKRARAG SKSDDIGNKT PKKNGIEHEA TKSSETVIEM TPSGPIAESK KWKESIARVV 60
61 KSVVSIRFSQ VAAFDTDESG TGEASAFVVD AKNGYMLTNR HVVCAGPFVG HAVFDNHEEV 120
121 EVFPVYRDPV HDFGFLRFDP KKIRYMNVEQ LELRPDLAKV GTEIRVVGND AAEKLSILAG 180
181 WISRIDRNVP DYGELTYCDF NTNYIQAAAN ASGGSSGSPV VERNGNVVAL QAGGHMIAAT 240
241 DYFLPLDRPL RALRCLQNNT PITRGTIQAQ FLIKTFDECS RLGLDSAMEE KVRTLFPEAT 300
301 SMLVVETVLP EGPSFKKLKE GDILLYVNSM ILINLIELES ILDESVGKDV VLTVQRGSEL 360
361 VELTCTAQST HDIA
|
| Detection Method: |  |
| Confidence: | 48.30103 |
| Match: | 1sozA |
| Description: | Crystal Structure of DegS protease in complex with an activating peptide |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.29457766519035 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.89864153190117 | bayes_pls_golite062009 |
| endopeptidase activity | 3.83715255212076 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.10188179747851 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.09356744910628 | bayes_pls_golite062009 |
| hydrolase activity | 2.95731933344861 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 2.91265669601085 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| protein binding | 1.32810553079123 | bayes_pls_golite062009 |
| binding | 0.714540979086077 | bayes_pls_golite062009 |
| nucleic acid binding | 0.51799784310141 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.285650646146901 | bayes_pls_golite062009 |
| DNA binding | 0.166098452144962 | bayes_pls_golite062009 |
| enzyme binding | 0.0323607861080599 | bayes_pls_golite062009 |
|
Region A: Residues: [375-475] |
1 11 21 31 41 51
| | | | | |
1 PDRYVEVCGA KFHNLSYQLA RQYALPVKGV FISEPAGSFR LEGPEYGYIL DSIAYKPVPD 60
61 LDTFIEVMRD IPDRSRVAVG YHFIHDKHSL ITDVVEIDRH W
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 1fc6A |
| Description: | Photosystem II D1 C-terminal processing protease |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 3.43316749555592 | bayes_pls_golite062009 |
| binding | 2.66667167586056 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.285650646146901 | bayes_pls_golite062009 |
| hydrolase activity | 0.167877702757621 | bayes_pls_golite062009 |
| enzyme binding | 0.0323607861080599 | bayes_pls_golite062009 |
|
Region A: Residues: [476-996] |
1 11 21 31 41 51
| | | | | |
1 LKAFRMVTRN DETGLWDFKN LGDPLPAEPS KPCTTSIPKL NVENFGPTAN IINCFVKVLY 60
61 YMPLHLDGSR KSRKKGTALV LDKDKGLAVT SRSTVPYDLG DLTITVADSI QIPAEVVHLH 120
121 PTQNLAFIKY DPKLLGDTPI QAAKLKDYYV SQGDPVNFFG FNSKSRVVAA KTSVTDVITM 180
181 VIPSSPMPRF RAINFESITV ESNLSTQCGS GVLTDDDGLV VALWLTHYGE QTSRGTDVKY 240
241 HLGLASPVVL STLRRLQSGV NVNPRILNVE FRAIQLAQAR SLGLPAERIR KIETESGKKH 300
301 QLFMITHVEA GTPRILTDGD IIISANGKSI TRIRDLQVDD VTEVDMEILR EGKVQTVKVP 360
361 TFPSDNCETN RVVICWGATL QAPHRAVRLQ IEDLPSNVFV TNRGRGSPAD QYDLGAAQFI 420
421 TAVNGVTTLN LEDFVREIRK IDDNSYVRVS TSTFDKVPVV LTIKMNKHYF PTIDLVQDAK 480
481 AENGWRAVQY DEVGEKKNPS MGFTIDEEVD DNTFDTEGEQ Q
|
| Detection Method: | |
| Confidence: | 72.69897 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.29457766519035 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.89864153190117 | bayes_pls_golite062009 |
| endopeptidase activity | 3.83715255212076 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.10188179747851 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.09356744910628 | bayes_pls_golite062009 |
| hydrolase activity | 2.95731933344861 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 2.91265669601085 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| protein binding | 1.32810553079123 | bayes_pls_golite062009 |
| binding | 0.714540979086077 | bayes_pls_golite062009 |
| nucleic acid binding | 0.51799784310141 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.285650646146901 | bayes_pls_golite062009 |
| DNA binding | 0.166098452144962 | bayes_pls_golite062009 |
| enzyme binding | 0.0323607861080599 | bayes_pls_golite062009 |
