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Protein Overview: YIFC_SCHPO

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..374] PSI-BLAST 48.30103 Crystal Structure of DegS protease in complex with an activating peptide
2 View Details [375..475] PSI-BLAST 6.69897 Photosystem II D1 C-terminal processing protease
3 View Details [476..996] PSI-BLAST 72.69897 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • peptidase activity
  • 4.29457766519035 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 3.89864153190117 bayes_pls_golite062009
  • endopeptidase activity
  • 3.83715255212076 bayes_pls_golite062009
  • serine hydrolase activity
  • 3.10188179747851 bayes_pls_golite062009
  • serine-type peptidase activity
  • 3.09356744910628 bayes_pls_golite062009
  • hydrolase activity
  • 2.95731933344861 bayes_pls_golite062009
  • serine-type endopeptidase activity
  • 2.91265669601085 bayes_pls_golite062009
  • catalytic activity
  • 1.40927913545237 bayes_pls_golite062009
  • protein binding
  • 1.32810553079123 bayes_pls_golite062009
  • binding
  • 0.714540979086077 bayes_pls_golite062009
  • nucleic acid binding
  • 0.51799784310141 bayes_pls_golite062009
  • protein C-terminus binding
  • 0.285650646146901 bayes_pls_golite062009
  • DNA binding
  • 0.166098452144962 bayes_pls_golite062009
  • enzyme binding
  • 0.0323607861080599 bayes_pls_golite062009
    2
    Term Confidence Notes
  • protein binding
  • 3.43316749555592 bayes_pls_golite062009
  • binding
  • 2.66667167586056 bayes_pls_golite062009
  • protein C-terminus binding
  • 0.285650646146901 bayes_pls_golite062009
  • hydrolase activity
  • 0.167877702757621 bayes_pls_golite062009
  • enzyme binding
  • 0.0323607861080599 bayes_pls_golite062009
    3
    Term Confidence Notes
  • peptidase activity
  • 4.29457766519035 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
  • 3.89864153190117 bayes_pls_golite062009
  • endopeptidase activity
  • 3.83715255212076 bayes_pls_golite062009
  • serine hydrolase activity
  • 3.10188179747851 bayes_pls_golite062009
  • serine-type peptidase activity
  • 3.09356744910628 bayes_pls_golite062009
  • hydrolase activity
  • 2.95731933344861 bayes_pls_golite062009
  • serine-type endopeptidase activity
  • 2.91265669601085 bayes_pls_golite062009
  • catalytic activity
  • 1.40927913545237 bayes_pls_golite062009
  • protein binding
  • 1.32810553079123 bayes_pls_golite062009
  • binding
  • 0.714540979086077 bayes_pls_golite062009
  • nucleic acid binding
  • 0.51799784310141 bayes_pls_golite062009
  • protein C-terminus binding
  • 0.285650646146901 bayes_pls_golite062009
  • DNA binding
  • 0.166098452144962 bayes_pls_golite062009
  • enzyme binding
  • 0.0323607861080599 bayes_pls_golite062009




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle