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View Structure Prediction Details

Protein: YG62_SCHPO
Organism: Schizosaccharomyces pombe 972h-
Length: 594 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YG62_SCHPO.

Description E-value Query
Range
Subject
Range
gi|25534796 - pir||AH2425 hypothetical protein all4960 [imported] - Nostoc sp. (strain PCC 7120)
gi|17134098, gi|... - gi|17232452|ref|NP_489000.1| hypothetical protein all4960 [Nostoc sp. PCC 7120], gi|17134098|dbj|BAB...
316.0 [0..34] [591..2]
gi|75702177, gi|... - gi|75908452|ref|YP_322748.1| hypothetical protein Ava_2235 [Anabaena variabilis ATCC 29413], gi|7570...
309.0 [0..37] [591..1]
gi|186465550, gi... - gi|23129126|ref|ZP_00110959.1| COG0661: Predicted unusual protein kinase [Nostoc punctiforme PCC 731...
299.0 [0..95] [589..12]
gi|67855521, gi|... - gi|67922593|ref|ZP_00516099.1| ABC-1 [Crocosphaera watsonii WH 8501], gi|67855521|gb|EAM50774.1| ABC...
296.0 [0..95] [592..46]
gi|22295385, gi|... - gi|22299203|ref|NP_682450.1| hypothetical protein tlr1660 [Thermosynechococcus elongatus BP-1], gi|2...
292.0 [0..80] [589..5]
gi|71675663, gi|... - gi|71675663|ref|ZP_00673407.1| ABC-1 [Trichodesmium erythraeum IMS101], gi|71671131|gb|EAO27797.1| A...
291.0 [0..92] [581..55]
gi|35213695, gi|... - gi|37522693|ref|NP_926070.1| hypothetical protein glr3124 [Gloeobacter violaceus PCC 7421], gi|35213...
291.0 [0..64] [591..7]
Y1796_ARATH - Uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic OS=Arabidopsis thalia...
290.0 [0..26] [590..17]
gi|33862270, gi|... - gi|33862270|ref|NP_893831.1| hypothetical protein PMM1714 [Prochlorococcus marinus subsp. pastoris s...
289.0 [0..87] [592..9]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSYVLTSQV LVYNYSKRKN YWHFWLRSFM SNNRKFLVHI HLIPHLNSLY SICFLGFPGQ  60
   61 ELLVASDHIQ KRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-594]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HHKPAVVGAS ITLMASVALV DFDPVKHAGV SSKRAYRVVL AGFLCFSDYK KVLGSSYASE  60
   61 EERQLALSEC HLRCAERSLK VFEENGGIYI KIGQHLSAMG YVIPKEWTNT MVKLQDRCPS 120
  121 TSLKDIDHLF RVDTGKGLDE TFDEFDPIAL GVASLAQVHK ARLKDSDVWV AVKVQHPSVS 180
  181 LNSPLDLSMT RWVFKAIKTF FPDFKLMWLA DEIERSLPQE LDFTREAKNS IETKEHFAHL 240
  241 STSLYVPEVM WSKPRILVME YVAGARIDNL SFMDEHSISR DLVSVDICHI FNEMIFGKGG 300
  301 HLHCDPHGGN VLIRSKPKNS KSPRNYEIVL LDHGLYRDIP HELQVDYANM WLNIINFNEK 360
  361 NLKFYAKKVA NVSDENFPIF ATAITGRPYK SLKSLPIGGP NHEEEQKKFI SALQKGGMLQ 420
  421 SIIRLLSTMP RLTLLLMKTN DLVRSLDENL KTKSGPEKLY LIMARYCLRC VYDDKMDSLW 480
  481 NSRSFWVSKV FKGTYYRLSY LFSSLKYTLA ENYFYYKHMY L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.0
Match: 2fo0A
Description: No description for 2fo0A was found.

Predicted functions:

Term Confidence Notes
protein kinase activity 2.78878187773119 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.65696220652782 bayes_pls_golite062009
protein serine/threonine kinase activity 2.52043782881479 bayes_pls_golite062009
kinase activity 2.45757516485965 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.08265655536291 bayes_pls_golite062009
binding 1.72646207655432 bayes_pls_golite062009
catalytic activity 1.21655087018101 bayes_pls_golite062009
transferase activity 1.09650209608069 bayes_pls_golite062009
ATP binding 0.57612786382221 bayes_pls_golite062009
adenyl ribonucleotide binding 0.533622009869642 bayes_pls_golite062009
protein binding 0.529222066176906 bayes_pls_golite062009
adenyl nucleotide binding 0.516315256680509 bayes_pls_golite062009
purine ribonucleotide binding 0.366733507123411 bayes_pls_golite062009
ribonucleotide binding 0.366674148714169 bayes_pls_golite062009
purine nucleotide binding 0.355425813353478 bayes_pls_golite062009
nucleotide binding 0.350202706382045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle