| Protein: | U119A_MOUSE |
| Organism: | Mus musculus |
| Length: | 240 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for U119A_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
393.0 | [0..1] | [240..1] |
|
|
385.0 | [0..1] | [240..1] |
|
|
373.0 | [0..1] | [240..1] |
|
|
371.0 | [0..1] | [240..1] |
|
|
360.0 | [0..1] | [240..1] |
|
|
356.0 | [0..12] | [239..10] |
|
|
355.0 | [0..1] | [240..1] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MKVKKGGGGT GSGAEPVPGA SNRSAEPTRE PGAEAESGSE SEPEPGPGPR LGPLQGKQPI 60
61 GPEDVLGLQR ITGDYLCSPE ENIYKIDFVR FKIRDMDSGT VLFEIKK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-240] |
1 11 21 31 41 51
| | | | | |
1 PPVSERLPIN RRDLDPNAGR FVRYQFTPAF LRLRQVGATV EFTVGDKPVN NFRMIERHYF 60
61 RNQLLKSFDF HFGFCIPSSK NTCEHIYDFP PLSEELISEM IRHPYETQSD SFYFVDDRLV 120
121 MHNKADYSYS GTP
|
| Detection Method: | |
| Confidence: | 46.522879 |
| Match: | 1ksgB |
| Description: | GMP-PDE delta |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.79148906288627 | bayes_pls_golite062009 |
| ligand-gated channel activity | 1.5302582659987 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 1.5302582659987 | bayes_pls_golite062009 |
| protein binding | 1.48353517714382 | bayes_pls_golite062009 |
| gated channel activity | 1.42896395862304 | bayes_pls_golite062009 |
| cation channel activity | 1.4256218398774 | bayes_pls_golite062009 |
| ion channel activity | 1.40005559320777 | bayes_pls_golite062009 |
| substrate-specific channel activity | 1.36653752383074 | bayes_pls_golite062009 |
| channel activity | 1.35767020846709 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 1.35767020846709 | bayes_pls_golite062009 |
| metarhodopsin binding | 0.869827712400021 | bayes_pls_golite062009 |
| voltage-gated cation channel activity | 0.855931938850398 | bayes_pls_golite062009 |
| opsin binding | 0.839214663991459 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 0.789955030733139 | bayes_pls_golite062009 |
| voltage-gated channel activity | 0.780717736949525 | bayes_pls_golite062009 |
| potassium channel activity | 0.559325988586613 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.521778252711535 | bayes_pls_golite062009 |
| voltage-gated potassium channel activity | 0.512152861387956 | bayes_pls_golite062009 |
| inward rectifier potassium channel activity | 0.0912506266585198 | bayes_pls_golite062009 |
