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View Structure Prediction Details

Protein: gi|124000699, gi...
Organism: synthetic construct
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124000699, gi....

Description E-value Query
Range
Subject
Range
gi|114652879 - gi|114652879|ref|XP_001152220.1| PREDICTED: mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylgluc...
0.0 [1..447] [1..447]
MGAT2_PIG - Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Sus scrofa GN=MGAT2 PE=3 S...
0.0 [1..447] [1..446]
MGAT2_RAT - Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Rattus norvegicus GN=Mgat2...
0.0 [1..447] [1..442]
gi|61864843 - gi|61864843|ref|XP_590294.1| PREDICTED: similar to beta-1,2-N-acetylglucosaminyltransferase II [Bos ...
0.0 [1..447] [1..446]
MGAT2_MOUSE - Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase OS=Mus musculus GN=Mgat2 PE=1...
0.0 [1..447] [1..442]
gi|57090127 - gi|57090127|ref|XP_537434.1| PREDICTED: similar to Alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylgl...
0.0 [1..447] [1..446]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRIYKRKV LILTLVVAAC GFVLWSSNGR QRKNEALAPP LLDAEPARGA GGRGGDHPSV  60
   61 AVGIRRVSNV SAASLVPAVP QPEADNLTLR YRSLVYQLNF DQTLRNVDKA GTWAP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [116-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RELVLVVQVH NRPEYLRLLL DSLRKAQGID NVLVIFSHDF WSTEINQLIA GVNFCPVLQV  60
   61 FFPFSIQLYP NEFPGSDPRD CPRDLPKNAA LKLGCINAEY PDSFGHYREA KFSQTKHHWW 120
  121 WKLHFVWERV KILRDYAGLI LFLEEDHYLA PDFYHVFKKM WKLKQQECPE CDVLSLGTYS 180
  181 ASRSFYGMAD KV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [308-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DVKTWKSTEH NMGLALTRNA YQKLIECTDT FCTYDDYNWD WTLQYLTVSC LPKFWKVLVP  60
   61 QIPRIFHAGD CGMHHKKTCR PSTQSAQIES LLNNNKQYMF PETLTISEKF TVVAISPPRK 120
  121 NGGWGDIRDH ELCKSYRRLQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle