| Protein: | gi|218195110, gi... |
| Organism: | Oryza sativa Indica Group |
| Length: | 589 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|218195110, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
385.0 | [0..1] | [589..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MDSEDDMLDA NDSADDDFYS GGEAGLGGSD DGDADYDFAD HDSDDSAELL SHRQQQNYSI 60
61 LSEADIQQRQ EDDINRVSTV LSISKSEACV LLRNYNWSVS KVHDEWFA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [109-275] |
1 11 21 31 41 51
| | | | | |
1 DEEHVRKVVG FPEKLIEMPN DRELTCGICF ENCPRTSMSA AACGHPFCSA CWRGYISTSI 60
61 NDGPGCLMLR CPDPSCTAAV GQDMINSLAD DEDREKYGRY LRRSYIEDNR KTKWCPAPGC 120
121 EYAVEFVMGS GSYDVNCNCS YGFCWNCTEE AHRPVDCATV SKWILKN
|
| Detection Method: | |
| Confidence: | 2.85 |
| Match: | 2cklB |
| Description: | No description for 2cklB was found. |
|
Region A: Residues: [276-359] |
1 11 21 31 41 51
| | | | | |
1 SAESENMNWI LANSKPCPKC KRPIEKNQGC MHITCTPPCK FEFCWLCLGP WSEHGERTGG 60
61 FYACNRYEAA RQEGAYDESE RRRE
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1wd2A |
| Description: | Solution Structure of the C-terminal RING from a RING-IBR-RING (TRIAD) motif |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ubiquitin-protein ligase activity | 5.32809533104435 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 5.17943669371679 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 4.2482314105959 | bayes_pls_golite062009 |
| ligase activity, forming carbon-nitrogen bonds | 3.07217714843839 | bayes_pls_golite062009 |
| binding | 2.14721962003828 | bayes_pls_golite062009 |
| protein binding | 1.5975811408548 | bayes_pls_golite062009 |
| small conjugating protein-specific protease activity | 0.637551805535732 | bayes_pls_golite062009 |
| ligase activity | 0.63517530468004 | bayes_pls_golite062009 |
| ubiquitin-specific protease activity | 0.549461161056205 | bayes_pls_golite062009 |
| peptidase activity | 0.234160677232374 | bayes_pls_golite062009 |
| cysteine-type peptidase activity | 0.159023519781458 | bayes_pls_golite062009 |
| hydrolase activity | 0.156835837705934 | bayes_pls_golite062009 |
| catalytic activity | 0.14112008370434 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.087080412746045 | bayes_pls_golite062009 |
| transcription factor binding | 0.0370371235994398 | bayes_pls_golite062009 |
|
Region A: Residues: [360-589] |
1 11 21 31 41 51
| | | | | |
1 MAKNSLERYT HYYERWAANQ SSRQKALGDL LSLQNDKLEK LSDIQSQPES QLKFIIEAWL 60
61 QIVECRRVLK WTYAYGFYLP EHEHAKRQFF EYLQGEAESG LERLHQCAEK ELQVYLEAES 120
121 PSKDFNDFRT KLAGLTSVTR NYFENLVRAL ETGLNDVGPS TSHGTCSKSA TSKSLGSKSK 180
181 SSKSRASSTS SKTGGSSRGV DESNIWTCDQ CTYANPRSAR NCQACNNQHR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
