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View Structure Prediction Details

Protein: Eaf-PA, Eaf-PD, ...
Organism: Drosophila melanogaster
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eaf-PA, Eaf-PD, ....

Description E-value Query
Range
Subject
Range
gi|109503046, gi... - gi|157823007|ref|NP_001100763.1| ELL associated factor 1 [Rattus norvegicus], gi|149034174|gb|EDL889...
241.0 [0..5] [253..85]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMTKQKNSL AERLNIGEEV RELKLGATFN PKNTSTAFHT IKYDFKPASV DTSRMASVDV  60
   61 GSNNQVTVTV PNSESSGVPH TVYKGNQREY AKECLMIYDK ETGAITIEKL NHNIQVKKTR 120
  121 NEVTNKSVQL PGQNMGQPHN QGANGAAPVA VPVPGQGSGT APKMENSTMR ISTKTKVSTG 180
  181 SRRNNIIDFK PRNSPMQQNS PSRPVPVHRS PQSAPAWDAN NAQQTLPSIP LITDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [236-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDFGLRAALH NSGHGNTSGT AAGQPDFGST SSSTHIGKQR QAPPHGHGKR QQMHQRLSPP  60
   61 MAQQQQPSNY GR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [308-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYNGGHNHAQ QQQHHQRNSP QQQRPSAYGH GNSMPIDVDS SREHELTSQS VAQAAAALEQ  60
   61 QIGGALSASS SSSESDSSDS DSGSDSDDST EDDRSTQGQQ QDHQQQQQQQ HQVYQNHKHT 120
  121 QQQVAQQHHN QLPNLGLGSI SPAYGSSHQQ QHQQQMLPHQ QKQKQQSGIY ASNGGFPNDF 180
  181 LQNDLQLSSN SSDDDDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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