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View Structure Prediction Details

Protein: Eaf-PA, Eaf-PD, ...
Organism: Drosophila melanogaster
Length: 504 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Eaf-PA, Eaf-PD, ....

Description E-value Query
Range
Subject
Range
gi|109503046, gi... - gi|157823007|ref|NP_001100763.1| ELL associated factor 1 [Rattus norvegicus], gi|149034174|gb|EDL889...
241.0 [0..5] [253..85]

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Predicted Domain #1
Region A:
Residues: [1-235]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMTKQKNSL AERLNIGEEV RELKLGATFN PKNTSTAFHT IKYDFKPASV DTSRMASVDV  60
   61 GSNNQVTVTV PNSESSGVPH TVYKGNQREY AKECLMIYDK ETGAITIEKL NHNIQVKKTR 120
  121 NEVTNKSVQL PGQNMGQPHN QGANGAAPVA VPVPGQGSGT APKMENSTMR ISTKTKVSTG 180
  181 SRRNNIIDFK PRNSPMQQNS PSRPVPVHRS PQSAPAWDAN NAQQTLPSIP LITDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [236-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDFGLRAALH NSGHGNTSGT AAGQPDFGST SSSTHIGKQR QAPPHGHGKR QQMHQRLSPP  60
   61 MAQQQQPSNY GR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [308-504]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYNGGHNHAQ QQQHHQRNSP QQQRPSAYGH GNSMPIDVDS SREHELTSQS VAQAAAALEQ  60
   61 QIGGALSASS SSSESDSSDS DSGSDSDDST EDDRSTQGQQ QDHQQQQQQQ HQVYQNHKHT 120
  121 QQQVAQQHHN QLPNLGLGSI SPAYGSSHQQ QHQQQMLPHQ QKQKQQSGIY ASNGGFPNDF 180
  181 LQNDLQLSSN SSDDDDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle