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View Structure Prediction Details

Protein: CG3376-PA
Organism: Drosophila melanogaster
Length: 735 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG3376-PA.

Description E-value Query
Range
Subject
Range
gi|54637170, gi|... - gi|54637170|gb|EAL26573.1| GA17413-PA [Drosophila pseudoobscura], gi|125811710|ref|XP_001361994.1| G...
645.0 [0..4] [735..1]

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Predicted Domain #1
Region A:
Residues: [1-119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQQQPPWPS PISSSSSNPR GKCWLILVLM AVLPLVADVG ALPFLFTHIK PQINWTQPEM  60
   61 ESWVIEEQPR SIEPHLEPVL HPNRTHRALS SDSTDAEFLQ RLVSIRHNQT ASSRMLWYD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [120-219]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAGGDGLVYP PFVDKALKLL NLKQVAFEIE NSVMSKVTCT ACRAGAGMLQ HQIQSGKTDA  60
   61 ELIRMITDYC TNLNIQSARV CQGVAQLFGS ELIYVLKRVN 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 2dobA
Description: No description for 2dobA was found.

Predicted Domain #3
Region A:
Residues: [220-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSPDELCSFV IGDGCADVYN PYHEWEVIFP PVPKPPRLPD LPIPMEAAPF FKVLHISDTH  60
   61 YDPHYAEGSN ADCNEPLCCR LSSGRPATPN AAAGKWGDYR KCDTPKRTVD HMLSHIAETH 120
  121 KDIDYILWTG DLPPHDVWNQ TKEENLAIIK DTVKQMVEMF PGVPIFPALG NHESAPVNSF 180
  181 PPPYVNQVDI SISWLYDELD IQWRRWLPQS VTHTVRRGAF YSVLVRPGFR IISLNMNYCN 240
  241 NKNWWLLLNS TDPATELQWF IYELQSAEFS NEKVHVIGHI PPGHSDCLKV WSRNFYKIIS 300
  301 RYESTVTAQF YGHTHYDEFE MFYDPHDLNH PNGIAYIGPS VSPYYDLNPG YRIYYVDGDH 360
  361 DATTRLVIDH ESWIMNLKEA NLYGYPIWYK LYTARAAYNM KALRPSDWNN LLNEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 1xzwA
Description: Sweet potato purple acid phosphatase/phosphate complex
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [635-735]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TNNQELFELY YKYYWKNSPA RPTCDAECKK RLICDCRSGR SHDRKHFCAE VESKIDEESS  60
   61 KSWKSWFYKG LTNSAEDRTE EPAPTTDGYG PFDVVIVNVG G

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle