| Protein: | FBpp0310200, CG1... |
| Organism: | Drosophila melanogaster |
| Length: | 1046 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0310200, CG1....
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..1] | [993..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MLKDAHQKLI KHRQSTKLSM TDFACQAAPV KQPLPLELPL PLSVQLQLLA KTPTSDHAPM 60
61 HSTPPTTPPT PPPLPLNMSQ SASAVTEAAT PENSLPATPP SEGALAVP
|
| Detection Method: |  |
| Confidence: | 11.0 |
| Match: | 2cr2A |
| Description: | Solution structure of N-terminal domain of speckle-type POZ protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [109-299] |
1 11 21 31 41 51
| | | | | |
1 SAPQDHYSLR WNNHQNHILR AFDALLKTKT LVDVTLVCAE TSIRAHKMVL SACSPFFQRV 60
61 FAETPCKHPV IVLKDFRGWV VQAIVDFMYR GEISVPQQRL QTLIQAGESL QVRGLVESSV 120
121 PEHTPTPAAS PDDFGMLDTS MLSSTFEDEC PTMVRPSKGG KLLMPSARLF GNASSAIAAL 180
181 GLRRKREQES D
|
| Detection Method: | |
| Confidence: | 32.522879 |
| Match: | 2nn2A |
| Description: | No description for 2nn2A was found. |
|
Region A: Residues: [300-407] |
1 11 21 31 41 51
| | | | | |
1 RDLESDQELG GSSPMPRRKQ ARPRRRSGDV PHDFTLNKTD AESLQTVIKH ELLERAERDQ 60
61 EEAPDQDNSQ GEAEKISSSP AKTLVERAKE QKSMKEEGSD QPRSLNEN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [408-626] |
1 11 21 31 41 51
| | | | | |
1 HHQLELDDED DDDQDHEEEE EQDIEELIHT TNELRRQAAA AAANAAAMSP NPSPCLSDGP 60
61 EDLCTTKKGK ELISGPSSSA DCESNNNNSS KLQDNNQRIM LSLKDIRQLN ANPNPTAIHT 120
121 PTSCSGGNNG LLTFPPPGLR PPGLPDSPPC HMEALEAQMH AAAAAAVAAA GSGEHPFHHM 180
181 EHQMEMSLAA AAAAAAMHQR EPRDPRDGRD HNAFASNLL
|
| Detection Method: | |
| Confidence: | 7.522879 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
|
Region A: Residues: [627-771] |
1 11 21 31 41 51
| | | | | |
1 GPMGMPPFGG HNGGHPGNSG PGNGCPGQAA HERLEESMNR LSKELGKEFG KEFGKEFGKE 60
61 FGPASPMSLQ GPFNAPDGPP HPPSPLPFPG MSSAMTLTPP HMFGLDSPLG LFPPGIDPGK 120
121 LYNPLMEMSD PRDMPGGPPP FLKKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [772-886] |
1 11 21 31 41 51
| | | | | |
1 MPRPKGQHSA PRGGPPRSWT NTELTEALQH VWNKKMTTSQ ASRIFGIPYN SLLMYVRGKY 60
61 GKSLKLEQLR KDCISGPPIE MLQMGIGGGS GGSTKNEKSK ERKEKEKDKN SMSSN
|
| Detection Method: | |
| Confidence: | 2.23 |
| Match: | 2cobA |
| Description: | Solution structures of the HTH domain of human LCoR protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [887-1046] |
1 11 21 31 41 51
| | | | | |
1 GSGGSANSQG GAPTSGSGPM QHSGELGPMG QLDLDLGLPL GPPGGPRSNS SEPDLLSAPN 60
61 ALFNPFNPQG FYPDFSGGFP GLPLSMLNLL PPAERHHAAA AMHHLGVSMD EDCKSVGSKQ 120
121 SSSVDEDYSG PGIPLSLEHR REISATGPPL TPSNGGTGHD
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
