| Protein: | CG5404-PA |
| Organism: | Drosophila melanogaster |
| Length: | 627 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5404-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
358.0 | [0..3] | [622..70] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MYPQLETEAE ALEKATARAL LPGAISKPAS EAGKAPRMNK WKRRLHRHVP VFQWLPLYST 60
61 EWGIDDFIAG ITLGLTIIPE SMACALLAGL PARYGLCSAF IGPLIYMVFG SIDKVIIGPT 120
121 SLVALVSVQF TVGRPIEFAF LLTFLSGIVQ IIMGTMRMGF IFEFISMPVI KAFSSATAIL 180
181 VIESQLKVLL GIKYLVAGLM NSVGMLSSR
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-384] |
1 11 21 31 41 51
| | | | | |
1 IEESNMADLI MGVCAIVFLL LLELLDRVAN NEKRNKILRI FCRYLSTSRN TLIVLIAAIV 60
61 SFIWIQKCGQ VPYALSKNAL STLPNFTVPS FHIETAERNY SIWEVLKELN IGIIVIPIVG 120
121 ILTNISIGKL TPKGLVDTNQ ELLTVGLCNM FGSCVQAMPS SGAFTRYAIS TACGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-458] |
1 11 21 31 41 51
| | | | | |
1 RTPMANLYLG IIVLLALSYL SPYFNYIPEA TLAAILICSI FTLLDFKLPM RLWRDSKRDF 60
61 ATWLLCFCVS VLFG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [459-627] |
1 11 21 31 41 51
| | | | | |
1 VEVGLFVSIV VTALHLLFLW ARPEIRVKIE QLDEMQYIRV TPSNGIYFPA INYLRERVLK 60
61 ACEQADFRIT VVIDGQRISG MDYTAAQGIS KLSSDLCRQA DASSSTLLIL FRFPEHLQRL 120
121 IDNTDNLVFC ESENKVKEFL TQESLRNGYI NLKEHIRASI DLGYKIDID
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1tidB |
| Description: | Crystal Structures of the ADP and ATP bound forms of the Bacillus Anti-sigma factor SpoIIAB in complex with the Anti-anti-sigma SpoIIAA: Poised for phosphorylation complex with ATP, crystal form I |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.97991551312897 | bayes_pls_golite062009 |
| protein binding | 1.39062728142841 | bayes_pls_golite062009 |
