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Protein Overview: CG5404-PA

General Information:
Name(s) found: CG5404-PA / FBpp0082619 [FlyBase]
Description(s) found:
Found 20 descriptions.
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  • This gene is referred to in FlyBase by the symbol Dmel\CG5404 (CG5404, FBgn0038354). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:11530417..11534156. It has the cytological map location 89A2. Based on sequence similarity, it is predicted to have molecular function</span>: high affinity sulfate transmembrane transporter activity. An electronic pipeline based on InterPro domains suggests that it is involved in the biological process</span>: transmembrane transport. 2 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 627 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: transmembrane transport [IEA]
    Molecular Function: high affinity sulfate transmembrane transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYPQLETEAE ALEKATARAL LPGAISKPAS EAGKAPRMNK WKRRLHRHVP VFQWLPLYST  60
   61 EWGIDDFIAG ITLGLTIIPE SMACALLAGL PARYGLCSAF IGPLIYMVFG SIDKVIIGPT 120
  121 SLVALVSVQF TVGRPIEFAF LLTFLSGIVQ IIMGTMRMGF IFEFISMPVI KAFSSATAIL 180
  181 VIESQLKVLL GIKYLVAGLM NSVGMLSSRI EESNMADLIM GVCAIVFLLL LELLDRVANN 240
  241 EKRNKILRIF CRYLSTSRNT LIVLIAAIVS FIWIQKCGQV PYALSKNALS TLPNFTVPSF 300
  301 HIETAERNYS IWEVLKELNI GIIVIPIVGI LTNISIGKLT PKGLVDTNQE LLTVGLCNMF 360
  361 GSCVQAMPSS GAFTRYAIST ACGLRTPMAN LYLGIIVLLA LSYLSPYFNY IPEATLAAIL 420
  421 ICSIFTLLDF KLPMRLWRDS KRDFATWLLC FCVSVLFGVE VGLFVSIVVT ALHLLFLWAR 480
  481 PEIRVKIEQL DEMQYIRVTP SNGIYFPAIN YLRERVLKAC EQADFRITVV IDGQRISGMD 540
  541 YTAAQGISKL SSDLCRQADA SSSTLLILFR FPEHLQRLID NTDNLVFCES ENKVKEFLTQ 600
  601 ESLRNGYINL KEHIRASIDL GYKIDID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..209] MSA 7.921992 View MSA. No confident structure predictions are available.
    2 View Details [210..384] MSA 1.937992 View MSA. No confident structure predictions are available.
    3 View Details [385..458] MSA 2.929996 View MSA. No confident structure predictions are available.
    4 View Details [459..627] PSI-BLAST 3.69897 Crystal Structures of the ADP and ATP bound forms of the Bacillus Anti-sigma factor SpoIIAB in complex with the Anti-anti-sigma SpoIIAA: Poised for phosphorylation complex with ATP, crystal form I

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.97991551312897 bayes_pls_golite062009
  • protein binding
    		•  1.39062728142841 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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