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View Structure Prediction Details

Protein: Sgs5-PA
Organism: Drosophila melanogaster
Length: 163 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Sgs5-PA.

Description E-value Query
Range
Subject
Range
CG7587-PA - This gene is referred to in FlyBase by the symbol Dmel\CG7587 (CG7587, FBgn0038523). It is a protein...
221.0 [0..1] [160..1]
gi|54637615, gi|... - gi|54637615|gb|EAL27017.1| GA20459-PA [Drosophila pseudoobscura], gi|125773245|ref|XP_001357881.1| G...
136.0 [0..44] [152..26]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFNIKLLLLL LAVSWFHHGQ AVQETKIEEK PVSEPEIESE IKNSTSVPSK CNIYYRNYQW  60
   61 ALQDCVCRCF QNECLMQIES DQRKKEGRSP FVPVTEELCR SFICKKCSVG FPVVAEFPIP 120
  121 APCGCNRKPG SIATERFYSL CHLLKFSAEN SKPFLTYSYC WPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle