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View Structure Prediction Details

Protein: CG15547-PA
Organism: Drosophila melanogaster
Length: 390 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG15547-PA.

Description E-value Query
Range
Subject
Range
gi|206580, gi|13... - gi|206580|gb|AAA42017.1| RBL-NDP kinase 18kDa subunit (p18), ref|NP_114021.1| nucleoside diphosphate...
247.0 [0..2] [135..4]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFENSLFIIK PDYLHKRRPV LLKLLAEGFQ IQGNRRIAFS PETAAEFYAD YADEKGFMLE  60
   61 VILLSKGVSE AFIVTKENAV QELLNIMICY FGSASDLERN IHVTKNSYSV AREINFIFPN 120
  121 YIHEPHQMFD HNNFCNRPML KP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 64.522879
Match: 1nskR
Description: Nucleoside diphosphate kinases
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.35981009046932 bayes_pls_golite062009
nucleoside diphosphate kinase activity 3.25178488081583 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 3.00995437354018 bayes_pls_golite062009
kinase activity 1.58348632049803 bayes_pls_golite062009
catalytic activity 1.54275558650196 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.10074088410853 bayes_pls_golite062009
transferase activity 1.01095942675678 bayes_pls_golite062009
binding 0.8707688422879 bayes_pls_golite062009
protein binding 0.136008742581077 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [143-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLEEIYDIMQ NTDCSQENWK VRVSDYLVRS NPKMPEISNQ CQQRPDVAIQ DKSQQTTMTY  60
   61 APKPSARAAQ PGVKKTQSSS APLSTTSPHS SMLLSSSSCV TCGGFERSQP GISDLDLNKR 120
  121 VEPHDEEPVC 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [273-390]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDEEILWKEV IVYEEIQPEA EEQESKEDLH DLEEEGVGES GGSDAESDRS VHEAPPPPAQ  60
   61 DDESEEGDAA AGEPGETAPA PEVAPPAQEA TAAPEVPAVA EEHPHAAEAP AEEAPPGE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle