| Protein: | plexA-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1945 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for plexA-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1869.0 | [0..1] | [1945..1] |
|
Region A: Residues: [1-759] |
1 11 21 31 41 51
| | | | | |
1 MNFVLSVLLI AILKDKYDYW LPSRTGCQTL AANIWSDKTT AQNEPINLTN ANAPIKNAKN 60
61 LNSTITNVAA FDTKLNHLLV DTITGRVFVG GVNRLYQLSP DLELSETVKT GPQNDSVECS 120
121 ILDCPLNAVR SPTDNYNKVL LIDRATSRLI ACGSLFQGTC TVRNLQNVSI IEHEVPDAVV 180
181 ANDANSSTVA FIAPGPPQHP VTNVMYVGVT YTNNSPYRSE IPAVASRSLE KTKMFQIASS 240
241 AVTTGTRTFI NSYARETYFV NYVYGFSSER FSYFLTTQLK HSHHSSPKEY ITKLVRICQE 300
301 DSNYYSYTEI PVECISDAQG GTKFNLVQAG FLGKPSSDLA QSLGISIQDD VLFAVFSKGE 360
361 GNTPTNNSAL CIYSLKSIRR KFMQNIKSCF NGSGMRGLDF ISPSMPCVLT KLQTIGEDFC 420
421 GLDVNSPLGG ETPITSVPVA MFNTKLTSVA ATSTSGYTVV FVGTSDGFLK KVVIESSSIA 480
481 NEYASFAVDL GSEINRDMQF DNQNLYIYVM SKTKVSKVKV FDCSDYKTCG DCLGARDPYC 540
541 GWCSLENKCS PRSNCQDDAN DPLYWVSYKT GKCTTITSVV PHQLQRTTAR TLELIIDHLP 600
601 QLKENLICAF TTEDKALFTN ATKKRNGVNC TTPRTDMLPQ IEQGKHHFTA KLSVRTRNGP 660
661 DLVSTDFTFF DCSTHSSCTR CVSSEFPCDW CVEAHRCTHD TAENCRNDIL VTGVSRIGPS 720
721 YRSGPGFCPT INATGDGSEV LVAGGTSKSI KVKVHIIGQ
|
| Detection Method: |  |
| Confidence: | 79.045757 |
| Match: | 2uzxB |
| Description: | No description for 2uzxB was found. |
|
Region A: Residues: [760-1014] |
1 11 21 31 41 51
| | | | | |
1 FIVQTRFVCQ FNIEGRVTSL NAQLLGDTIY CDSMEFQYTS RSPNLTATFA VIWGGSKPLD 60
61 NPHNIHVVIY RCREMADSCG ICLALSEKYN CGWCSSTNTC EVEEQCNKNK EGKTDWLNRS 120
121 EICPNPEIHT FQPKTGPWEG GTNITIRGIN LGKNYNDIYS GVRIAGINCM PFPQFYIDTK 180
181 QIVCTVDSPG EQMYRNGKIV VQIGDYRGES KEDYEFVDPK ILDFNPKFGP TSGGTEIHIT 240
241 GKHLNAGSRI QASIN
|
| Detection Method: | |
| Confidence: | 3.221849 |
| Match: | 1yo8A |
| Description: | Strucuture of the C-terminal domain of human thrombospondin-2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1015-1189] |
1 11 21 31 41 51
| | | | | |
1 DHLPCKILST DSSQAICRTS ASPGIIEGRL KMSFDNGPRE FNDYNFKYVL DPTVEHVSSG 60
61 PSGQIKVPKG IPAGGIRISV TGTQFTSIQN PNIYVVYNGE MYASPCRVQS DTEMECASPV 120
121 VDVDSHVIEA ERPILLEYGF LMDNVLRVQN LSKVHNNHFE LYPNPEYFIF EERVK
|
| Detection Method: | |
| Confidence: | 5.031517 |
| Match: | PF01833.15 |
| Description: | No description for PF01833.15 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1190-1273] |
1 11 21 31 41 51
| | | | | |
1 YFKSEYLTIN GRNLDRACKE SDVEVKIGNG FCNITSLSRQ QLTCRPPSEA TATKSMNGPE 60
61 VIVRIGTSLE YRIGILSYES SNII
|
| Detection Method: | |
| Confidence: | 0.987 |
| Match: | 2cxkA |
| Description: | Crystal structure of the TIG domain of human calmodulin-binding transcription activator 1 (CAMTA1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1274-1547] |
1 11 21 31 41 51
| | | | | |
1 LDWGENVIFA VIATIVILLL IFVALLVAYK KKSSESSRVL RNMQEQMDIL ELRVAAECKE 60
61 AFAELQTEMT DLTGDLTSGG IPFLDYRSYA MKILFPNHED HIVLQWERPE LLRKEKGLRI 120
121 FGQLIMNKTF LLLFIRTLES NRYFSMRERV NVASLIMVTL QSKLEYCTDI LKTLLGDLIE 180
181 KCIEGKSHPK LLLRRTESVA EKMLSAWFTF LLYKFLKECA GEPLYMLFRA VKGQVDKGPV 240
241 DACTHEARYS LSEEKLIRQS IDFRPMNVYA SIIQ
|
| Detection Method: | |
| Confidence: | 16.568636 |
| Match: | PF08337.3 |
| Description: | No description for PF08337.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1548-1687] |
1 11 21 31 41 51
| | | | | |
1 QPIFCNNLDM LPSHTENVSV KVLDCDTIGQ VKEKCLETIY RNIPSSQRPR KDDLDLEWRT 60
61 GATGRVILYD EDVTSKTESE WKKLNTLQHY NVPDGAGLSL VPKQSSIYNF SILSDKNEKS 120
121 HKYETLNISK YTSSSPTFSR
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2r2oA |
| Description: | No description for 2r2oA was found. |
|
Region A: Residues: [1688-1945] |
1 11 21 31 41 51
| | | | | |
1 AGSPLNNDMH ENGLRYWHLV KHHDSDMQKE GERVNKLVSE IYLTRLLATK GTLQKFVDDL 60
61 FETIFSTAHR GSALPLAIKY MFDFLDDQAQ LHGITDPEVV HTWKSNSLPL RFWVNLIKNP 120
121 NFVFDIHKSN IVDSCLSVVA QTFMDSCSTS DHRLGKDSPS SKLLYAKDIP EYRKWVDRYY 180
181 RDIRDMSPIS DQDMNAMLAE ESRLHTTEFN TNCALHELYT YAVKYNEQLT VTLEEDEFSQ 240
241 KQRLAFKLEQ VHNIMSSE
|
| Detection Method: | |
| Confidence: | 1.49 |
| Match: | 1nf1A |
| Description: | GAP related domain of neurofibromin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| GTPase regulator activity | 4.62613920988983 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 4.60285041042816 | bayes_pls_golite062009 |
| small GTPase regulator activity | 4.29435235604933 | bayes_pls_golite062009 |
| GTPase activator activity | 4.13669967154451 | bayes_pls_golite062009 |
| Ras GTPase activator activity | 4.05218513298437 | bayes_pls_golite062009 |
| enzyme regulator activity | 3.98479257898428 | bayes_pls_golite062009 |
| Rho GTPase activator activity | 3.8483177561348 | bayes_pls_golite062009 |
| Rac GTPase activator activity | 3.81745527802437 | bayes_pls_golite062009 |
| enzyme activator activity | 3.68130398795056 | bayes_pls_golite062009 |
| ErbB-3 class receptor binding | 2.28649100165615 | bayes_pls_golite062009 |
| protein binding | 2.19203994051073 | bayes_pls_golite062009 |
| signal transducer activity | 1.85770920700616 | bayes_pls_golite062009 |
| molecular transducer activity | 1.85770920700616 | bayes_pls_golite062009 |
| receptor activity | 1.82582454265265 | bayes_pls_golite062009 |
| binding | 1.60176934286866 | bayes_pls_golite062009 |
| Rho guanyl-nucleotide exchange factor activity | 0.764662318607061 | bayes_pls_golite062009 |
| receptor binding | 0.0304154938872172 | bayes_pls_golite062009 |
