Protein: | gi|7522461, gi|1... |
Organism: | Schizosaccharomyces pombe |
Length: | 695 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7522461, gi|1....
Description | E-value | Query Range |
Subject Range |
|
813.0 | [0..1] | [695..59] |
|
812.0 | [0..1] | [695..38] |
|
342.0 | [0..465] | [682..3] |
|
329.0 | [0..466] | [685..7] |
|
319.0 | [0..477] | [685..56] |
|
316.0 | [0..455] | [685..114] |
|
315.0 | [0..477] | [685..60] |
|
314.0 | [0..456] | [682..33] |
|
313.0 | [0..477] | [685..56] |
Region A: Residues: [1-248] |
1 11 21 31 41 51 | | | | | | 1 ISSHRPEASS LLDFLVKDQK KSGDISLHTK FNLYVDDLLK KSEKGQIKKF INDIKKDLAT 60 61 ESQLPLSAPF KDESTRTMTD PQVLAYIHQS MPYQYASLYS VLTDLKIVNS DVSCKSQHIL 120 121 DCGKGPGIGA LASYSVFPTP NSVSIVEENP FLKKIIYDIH HNIYPSTSPN PTSPVTLNRL 180 181 PLGKKDSYTL VIASNKLLEM KSEKELFDYL RSLWSLVSND GGLLVLCERG TKRGFSLIQR 240 241 ARTFLLQK |
Detection Method: | ![]() |
Confidence: | 13.522879 |
Match: | 1qzzA |
Description: | Crystal structure of aclacinomycin-10-hydroxylase (RdmB) in complex with S-adensyl-L-methionine (SAM) |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
transferase activity | 1.07321114919891 | bayes_pls_golite062009 |
S-adenosylmethionine-dependent methyltransferase activity | 0.837368219068434 | bayes_pls_golite062009 |
transferase activity, transferring one-carbon groups | 0.644010137949015 | bayes_pls_golite062009 |
methyltransferase activity | 0.635463629299812 | bayes_pls_golite062009 |
RNA binding | 0.460713129603544 | bayes_pls_golite062009 |
rRNA methyltransferase activity | 0.431436890079007 | bayes_pls_golite062009 |
binding | 0.398865224607474 | bayes_pls_golite062009 |
N-methyltransferase activity | 0.290696180200503 | bayes_pls_golite062009 |
protein methyltransferase activity | 0.197622476100051 | bayes_pls_golite062009 |
DNA binding | 0.11976394186826 | bayes_pls_golite062009 |
nucleic acid binding | 0.115501290464633 | bayes_pls_golite062009 |
transcription regulator activity | 0.0754824189649688 | bayes_pls_golite062009 |
protein binding | 0.0283208412023089 | bayes_pls_golite062009 |
Region A: Residues: [249-507] |
1 11 21 31 41 51 | | | | | | 1 SKNTSDKQFN AHIVAPCPHD GRCPIDIENG VRANICSFKQ HFFLSPFSRL YVPRSHRRSS 60 61 DRSHYSYVVI QKGITRPLNN TTQRFKNDED LLENVNVTSP TLKNWPRIIR PPLKRDGHVI 120 121 IDVCDSDARL RRNIVPKSQG KLAYRLARKS AWGDLFPLEG KVQSTSPSSK ITKHLKDASS 180 181 TYSINPPSYN KPKVERNTTA DPIFVGKRFY STNRHKAFSR FADFNSHRFP CIFTSFSCYN 240 241 CISGTRKYSR QYSRDKFHY |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [508-695] |
1 11 21 31 41 51 | | | | | | 1 NQRTTIYYLV AISIFALGLT YAAVPLYRLF CSKTGYGGTL NTDQSRMNAE RMVPRKDNKR 60 61 IRVTFNGDVA GNLSWKLWPQ QREIYVLPGE TALGFYTAEN TSDHDIVGVA TYNIVPGQAA 120 121 VYFSKVACFC FEEQKLDAHE KVDLPVFFFI DPEFADDPNM KDIDDILLSY TFFEARYDTN 180 181 GNLLTKLN |
Detection Method: | ![]() |
Confidence: | 68.221849 |
Match: | 1so9A |
Description: | Solution Structure of apoCox11, 30 structures |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
structural molecule activity | 5.33211785603403 | bayes_pls_golite062009 |
binding | 1.26238051646126 | bayes_pls_golite062009 |
copper ion binding | 0.19463795974816 | bayes_pls_golite062009 |
catalytic activity | 0.176396048613815 | bayes_pls_golite062009 |