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View Structure Prediction Details

Protein: SPCC364.01
Organism: Schizosaccharomyces pombe
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPCC364.01.

Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEIITESI VKNFGSAETS VGEKQPKRKR SEVRAEKLKA RKLQKAAEIV QKQKENRKIL  60
   61 KDVSLKRLSK SLDRSLPSEN TIDQISFNHA MSEEDA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.891 a.177.1 Sigma2 domain of RNA polymerase sigma factors

Predicted Domain #2
Region A:
Residues: [97-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGYQIGDKHK NLLLYKLSSS SGSVFTENLY STIQEFLSAQ KVDIADSKNT YVFGSTFDKK  60
   61 SHALVKTSDS VRSLKYGSFV KACAPLFRFA SGIIKAHAPH FHQALLKLEL APSALRFGVF 120
  121 P

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.886 a.24.18 Description not found.

Predicted Domain #3
Region A:
Residues: [218-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NFSLQSVSNG YMSMESNFSS IKYGFVVIII VGELNDVELK IPAISHSLKL KDGSILVLRS  60
   61 SLLHQWYSLP KQSILYEIRL FAMSSLWHYE KNKSIKIAKK DDI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.892 d.20.1 UBC-like


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