| Protein: | SPAPB8E5.07c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1163 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAPB8E5.07c.
| Description | E-value | Query Range |
Subject Range |
|
|
1019.0 | [0..5] | [1129..4] |
|
|
1014.0 | [0..8] | [1128..12] |
|
|
994.0 | [0..8] | [1156..12] |
|
|
983.0 | [0..8] | [1142..17] |
|
|
980.0 | [0..8] | [1153..4] |
|
|
979.0 | [0..5] | [1128..3] |
|
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955.0 | [0..5] | [1129..3] |
|
|
938.0 | [0..8] | [1132..4] |
|
|
928.0 | [0..18] | [1151..115] |
|
Region A: Residues: [1-152] |
1 11 21 31 41 51
| | | | | |
1 MAEVNEPLQI ELRKIRNSST AGVINEFDVI VSAVEGTLKE QKTEATPTAY LVALLTLVKE 60
61 FTDLKKNFKG HTFQLLELVI KYVPSNVLQA KFPQILSVLA PVVNNAETNK TVLLPYLNVL 120
121 EKLLLLQDYS SWTHGNSCKT SIYILLFFAL SN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [153-859] |
1 11 21 31 41 51
| | | | | |
1 TEKTRVRSLQ ILANILKNPP AGPVTEHPAI KYTAFEPLRL LESLATAKKP KTPAEVQKLN 60
61 NSLVLIRVLC SSTHWPMTLV ERLCRSCVLI VGQRSTNSIL LVYQILDGLS KKSVDYTDAV 120
121 SLRMTLICLQ KLEPSEHDPI LMVGWLKAMN TAIRAFNILD KETAKYECLH RFKAFFTLLE 180
181 SESMEIRLQT ATTICSVIGC LDTTPNSFAV VEEICSFICD ALRDIRFRLA YPECFQIISS 240
241 LCDKLGPHSD PYLIPALEVI DYLRGSEGFD GKALVDEAIG SFVRAIGPEA MLRVLPLNLE 300
301 LNDKDAVGRA WLLPVLRDNI RFANLAHFTN YFVPLSGQLY QKVIEMNDLD SIPSKLLQTL 360
361 VDQIWSLLPG YCYLPLDLQS SFTLEFASIL VNVLYEQVSL RSVICNSLTA LVETNSKVAD 420
421 KLPLDDVISV PVSASDASSN LAFLTNMSSN FLSVLLNVFS STPSQYRYPI LKCIQTWIFI 480
481 SSNDTIHSVY KKVTDLLPDS LNDLAGSFNI AADGISSPMA YSLIDLLIVI SPYLNQDYAV 540
541 TLFEYVHEFL RHVNPAIQKK GYKLLGTLLR VDYGKAYATQ HVKEIFEELS SVADRVVSST 600
601 RKDRLASLNA LYELQSSELV IAIPQLLPEA IISLKEVNEK ARHTAFQLLF NIAKSAVNSV 660
661 EFGNSKPERV EKFVSVISAG LAGSSTHMIS ATIIAISSIV MEYKVFI
|
| Detection Method: | |
| Confidence: | 8.045757 |
| Match: | 2bkuB |
| Description: | Kap95p:RanGTP complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| RNA binding | 3.51706019693543 | bayes_pls_golite062009 |
| structural molecule activity | 2.89396355704664 | bayes_pls_golite062009 |
| protein transporter activity | 2.53371837790268 | bayes_pls_golite062009 |
| binding | 2.47395644967726 | bayes_pls_golite062009 |
| protein binding | 2.13529412360404 | bayes_pls_golite062009 |
| transporter activity | 1.75215962704174 | bayes_pls_golite062009 |
| nucleic acid binding | 1.64539435934931 | bayes_pls_golite062009 |
| mRNA binding | 1.49239143012448 | bayes_pls_golite062009 |
| signal sequence binding | 1.46991748555798 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.45007172288203 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.27627067567874 | bayes_pls_golite062009 |
| transcription regulator activity | 1.06250847754412 | bayes_pls_golite062009 |
| DNA binding | 0.946847037737779 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.58863391569272 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.506596930838594 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 0.501965300276747 | bayes_pls_golite062009 |
| transcription factor activity | 0.362911773502049 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.229272703956702 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.0330689772947346 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.00566872062869428 | bayes_pls_golite062009 |
|
Region A: Residues: [860-973] |
1 11 21 31 41 51
| | | | | |
1 SEPFLVQLIS TLNLFITSSK REIAKAAIDF IKISVSSFPV ECIKPLLPEL IPNLLAWSHE 60
61 GKANLRVKVR HLFEKMGRKY GIAEIEPFFP AEDKKLITNI RKTQERNIRK RAMK
|
| Detection Method: | |
| Confidence: | 38.0 |
| Match: | 1u6gC |
| Description: | Crystal Structure of The Cand1-Cul1-Roc1 Complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [974-1163] |
1 11 21 31 41 51
| | | | | |
1 RDPAKPSSAQ PRKTFASAYE AAVYDTDDEA EEEFENDEMN NGNGGDLRMD EAFVQEDNDE 60
61 EPLDLLDIEA VSKISSTDPR KKLAARKQKL NSAFKSNEEG RLLINDSDED ELIEDSLANA 120
121 QQHAEVNRTY LEAVAGKESF RRGLNNRVKF SNKRVRDDYD EEMEEVEVPE VTRKPAKQKF 180
181 DRKQRGQKGY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
