| Protein: | SPCC1620.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 595 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1620.12c.
| Description | E-value | Query Range |
Subject Range |
|
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211.0 | [0..30] | [465..215] |
|
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210.0 | [0..30] | [465..234] |
|
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210.0 | [0..30] | [465..92] |
|
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209.0 | [0..30] | [465..75] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MKEISLDYSS PSLQQTEEQD RELNFIDSSM LRPTPPQESD NRLAVEKPNI QPLQGHSPVP 60
61 SFMSTASTNI SSSKINNNQT E
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [82-203] |
1 11 21 31 41 51
| | | | | |
1 FEQLRDSYKS HGDLNSAIND SRIQSIIFEL NQQCEKESIP VSNIDWLQWA SVPLFAYDLP 60
61 PDPSNPNATS SSPPPLTPIL ELIKQNNFCI PSPCRKLVWQ SLVSAERNEL LTLYATLSTT 120
121 NN
|
| Detection Method: | |
| Confidence: | 39.0 |
| Match: | 2qq8A |
| Description: | No description for 2qq8A was found. |
|
Region A: Residues: [204-532] |
1 11 21 31 41 51
| | | | | |
1 SLDSSIRKII RMQSFRGPLE PFKYSSTTRH KVSTESIFHV LHAFTLFDTT VEYNIEPLLW 60
61 LTCAFLSYMA QGNAFRSLVC FIQRGGIREF FISQSSSLDE SLFALVWGCL GDLAPSVAIS 120
121 LQRIKVSSLC ILYPSLACCF ADSLQLPEAL RLMDLIAIYG LEMFVRLLVA IFLKDRDKIV 180
181 NMVSHEQWVK YLRSDVLASY RQPLVQKYTF YTRTPVDLNA WVEDSLALNI DTTQFPSYLS 240
241 YHETSVSHNT YRQNNLEELK NQNDYLTSQI TNLEEGMVML NKENTKLSEA LSNHRVTRSE 300
301 MEEATEILKN NSADLKAQLE KQPQELENR
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 2bnxA |
| Description: | Crystal structure of the dimeric regulatory domain of mouse diaphaneous-related formin (DRF), mDia1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.61658111885029 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| protein transporter activity | 2.43253558241952 | bayes_pls_golite062009 |
| protein binding | 2.13529412360404 | bayes_pls_golite062009 |
| clathrin binding | 2.07672364145383 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.01243877392722 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.851483195437252 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 0.59334859317426 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| nucleic acid binding | 0.169755106399802 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 0.0935103343162811 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.00492507437049428 | bayes_pls_golite062009 |
|
Region A: Residues: [533-595] |
1 11 21 31 41 51
| | | | | |
1 LLQEISILKQ RNQKFLKNNA TSIQQIQYLD EELGKTLKQL NDLKEKHAQL QTKWKSVSEM 60
61 FRN
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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