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View Structure Prediction Details

Protein: SPBC3H7.12
Organism: Schizosaccharomyces pombe
Length: 287 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPBC3H7.12.

Predicted Domain #1
Region A:
Residues: [1-197]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTEIDASVI VKEKEWLETN VLPEFWESMS EGLKEALNLI SSDDPTVLVF TSPKTDAVKG  60
   61 IVSRSSSNVV RVNVTAKVGR TTHVLKLKDS AIIHLDQILN LSNYMHYALY CLPRLRHNTE 120
  121 RAIKELQEIL HAIVCLLHSI MQEESEKEEI PSNASSISLK SQNSIVSRTS NPFSCLNHSP 180
  181 RQIHKTVRNH LFSPPLP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [198-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNLALSFSIS NASVCLHLFR LSGPNEVLES FAKNSVDIEM LKPFVSQRID AFSQDPILLA  60
   61 VTAKLSALQK KVNDVSYRFK TISSSLYGAK 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.816 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.780 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.780 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.772 a.4.5 "Winged helix" DNA-binding domain
View Download 0.744 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.735 a.101.1 Uteroglobin-like
View Download 0.704 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.596 a.118.14 FliG
View Download 0.573 a.4.1 Homeodomain-like


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle