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View Structure Prediction Details

Protein: CE01191
Organism: Caenorhabditis elegans
Length: 265 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE01191.

Description E-value Query
Range
Subject
Range
gi|157775093 - gi|157775093|ref|XP_001665612.1| hypothetical protein CBG17959 [Caenorhabditis briggsae AF16]
gi|39591530, gi|... - gi|39591530|emb|CAE71106.1| Hypothetical protein CBG17959 [Caenorhabditis briggsae], gi|187025025|em...
213.0 [0..1] [265..1]
gi|220942804 - gi|220942804|gb|ACL83945.1| CG11007-PA [synthetic construct]
FBpp0311843, CG1... - This gene is referred to in FlyBase by the symbol Dmel\CG11007 (CG11007, FBgn0034455). It is a prote...
184.0 [0..5] [263..3]
TMX2_MOUSE - Thioredoxin-related transmembrane protein 2 OS=Mus musculus GN=Tmx2 PE=1 SV=1
182.0 [0..3] [264..14]
gi|119114234, gi... - gi|119114234|ref|XP_319140.3| AGAP009997-PA [Anopheles gambiae str. PEST], gi|116118319|gb|EAA13899....
AGAP009997-PA - Thioredoxin domain-containing protein 14 homolog precursor|protein_coding|3R:47430060:47430884:1|gen...
181.0 [0..6] [265..4]
TMX2_RAT - Thioredoxin-related transmembrane protein 2 OS=Rattus norvegicus GN=Tmx2 PE=2 SV=1
180.0 [0..3] [264..14]
TMX2_PONAB - Thioredoxin-related transmembrane protein 2 OS=Pongo abelii GN=TMX2 PE=2 SV=1
gi|55725645 - gi|55725645|emb|CAH89604.1| hypothetical protein [Pongo abelii]
177.0 [0..3] [265..14]
gi|114642392, gi... - gi|114642396|ref|XP_001144458.1| PREDICTED: thioredoxin-related transmembrane protein 2 isoform 5 [P...
176.0 [0..3] [254..14]
TMX2 - thioredoxin-related transmembrane protein 2
175.0 [0..3] [254..14]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIPRLDEVR RALTAFHFFN TLLALAFPVI RSTSLCDYVF AVEGNEQCEI DSREREILMF  60
   61 LLIILAWKGR KATNWMHYVN NIFLFSKIAG MFLFIRADIL PGIIYILACL IVTVLFPEPV 120
  121 YNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [124-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PEQVTYFQGE QLFEELTRNR NTIWVIQFFT TWSPECRHTS PVFAELSQKF TLPNMKFGKL  60
   61 DIGRWAKEGE RFRVNAHPMS RQLPTICVFK DAKEIARRPL VNDSRRAVPF VFSEENCVLA 120
  121 FDLLNLYNEQ KEKKGAKAKK ED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.154902
Match: 2dj0A
Description: No description for 2dj0A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle