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View Structure Prediction Details

Protein: CE16162
Organism: Caenorhabditis elegans
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16162.

Description E-value Query
Range
Subject
Range
CE24188 - status:Confirmed UniProt:Q9N575 protein_id:AAF60450.1
577.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPSRTVLR ELTATKYVAN YTDEYQLETA RAGCSALPPQ PNINHDAIIE GHGEDVELVE  60
   61 DKNYRSLHRI DETPKLVDKK PSKAIIRDEA VKVLRDIQTM PIENLRLKRY DFFSQRWFNT 120
  121 TRESEKALVE HVLLHPNQRP HYFAAQCRML SAEDISSLIL TSLLAEPKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGQNVVRFAI QAKTAMPFQQ LFAILEKLEM EIEGFQMTDS FVVATLIRSQ SKSTTTRRLR  60
   61 TTNCREYGNL EPGLDSQGRL MASTASITCS IRGKRHVETR IVYNNNSSAR DPFRRYRYIE 120
  121 LEQTVKCMNR RVQIVEEPVE FHEFEVENDM VSLRNGMVLV DDLISFLETF ELDEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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