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View Structure Prediction Details

Protein: CE16162
Organism: Caenorhabditis elegans
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE16162.

Description E-value Query
Range
Subject
Range
CE24188 - status:Confirmed UniProt:Q9N575 protein_id:AAF60450.1
577.0 [0..1] [344..1]

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Predicted Domain #1
Region A:
Residues: [1-169]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAPSRTVLR ELTATKYVAN YTDEYQLETA RAGCSALPPQ PNINHDAIIE GHGEDVELVE  60
   61 DKNYRSLHRI DETPKLVDKK PSKAIIRDEA VKVLRDIQTM PIENLRLKRY DFFSQRWFNT 120
  121 TRESEKALVE HVLLHPNQRP HYFAAQCRML SAEDISSLIL TSLLAEPKE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [170-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TGQNVVRFAI QAKTAMPFQQ LFAILEKLEM EIEGFQMTDS FVVATLIRSQ SKSTTTRRLR  60
   61 TTNCREYGNL EPGLDSQGRL MASTASITCS IRGKRHVETR IVYNNNSSAR DPFRRYRYIE 120
  121 LEQTVKCMNR RVQIVEEPVE FHEFEVENDM VSLRNGMVLV DDLISFLETF ELDEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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