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View Structure Prediction Details

Protein: mlt-9
Organism: Caenorhabditis elegans
Length: 563 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mlt-9.

Description E-value Query
Range
Subject
Range
mlt-9 - status:Partially_confirmed UniProt:Q9U3K3 protein_id:CAB54204.1
600.0 [0..1] [563..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSATILLLL VHGTLACFPT SQRSYQYGAP TQQFAAAQPG PQPAAAAAAR VAAAGKTPTE  60
   61 PISVQGSSIE GLLGQKVSLT EFTADGYNAE GGGPVRSGNA LT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-389]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CNFDGRPCCW ANVPPPDDQL DWQIASGVPV QLQNRGVPQP EGSYLIAYAK SAAPSDEAQF  60
   61 ASCSIGCASS DIVVRAKHWQ SESVLLQVCL RESFPSNAER NPLINCQEFP YVDGMGTTEV 120
  121 ILPKTSLVDI VFVASNFIGD QGDVAILDDI EVSYDRNGSE CQNEFEEGAE EEDNQDNENA 180
  181 IRAEEIEAAA KNKRRELFEK TQPEGKIVSA TERFGANGFR GGEKAFRGGA ETGAGAGAGS 240
  241 KFGGSFEGAE NGNAAVGTSH TEETVFASVK TAKLPSGHVV AKGAKTA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.16
Match: 2v5yA
Description: No description for 2v5yA was found.

Predicted Domain #3
Region A:
Residues: [390-563]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EFSEVVCNAT KCDFENENTC GYKDAHTTQS IRGLTTKFNV VTGQFMNRVT GIKESTEGEY  60
   61 YAATFLFPRE MAGLEASVAP FTEQSRIRFH YYEGTHGVQL KGCCTNIENC PFSSDKFVTV 120
  121 ADRAWKTASF KCPKGTDKVI FICENTRTNQ GACAVDGIGL VENEGPLKTA KPLC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.30103
Match: 2c9aA
Description: Crystal structure of the MAM-Ig module of receptor protein tyrosine phosphatase mu
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.862864164515796 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle