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View Structure Prediction Details

Protein: unc-87
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-87.

Description E-value Query
Range
Subject
Range
gi|187029359, gi... - gi|39595815|emb|CAE67318.1| Hypothetical protein CBG12778 [Caenorhabditis briggsae], gi|187029359|em...
gi|157747765 - gi|157747765|ref|XP_001668977.1| Hypothetical protein CBG12778 [Caenorhabditis briggsae AF16]
378.0 [0..2] [374..176]

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Predicted Domain #1
Region A:
Residues: [1-163]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPTEDQVVA EEQPNATMET KVTGQGQPKR VGRWTLAQLR QTDGIIPSQA GWNKGDSQKL  60
   61 MTNFGTPRNT NTRVKSENLQ EIPEDIANRT HGEVRLQSGT NKYCSQRGMT GFGSGRDVCR 120
  121 EGVRVAQNPA DLAELPEEKI RMSEGIVRLQ AGTNKYDSQK GMT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [164-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GFGTGRRETT KMVDSKHPEY DHEKPDQSEI PLQSGTNKFA SQKGMTGFGT ARRETTKMVD  60
   61 SNHPDYSHEC SIDQTTIPSQ MGSNQYASQK GMTGFGQPRW EVLDPSISWQ NRKSQGMVRL 120
  121 QSGTNRFASQ AGMIGFGTCR NTTFEAEGGE LPYEAMKVSE TIIPSQAGWN KGDSQKKMTS 180
  181 FGAPRDVKGK HLKRIWELEY PEEAEISLDR L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.221849
Match: 1wymA
Description: Solution structure of the CH domain of human transgelin-2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle