| Protein: | CE33612 |
| Organism: | Caenorhabditis elegans |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33612.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..55] | [293..16] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MFRHVAQNLG SRNTSIQSYR LLRTRWERGY LKDLYHRRQI LGADPAISRS SYPNWDYDSE 60
61 L
|
| Detection Method: |  |
| Confidence: | 11.69897 |
| Match: | 2fflA |
| Description: | Crystal Structure of Dicer from Giardia intestinalis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [62-297] |
1 11 21 31 41 51
| | | | | |
1 YAFGHRIGAP EISEDQYIKA LTNESFFQRA DVEENVESAQ PGAEVGTEHN AELVKRGEQN 60
61 LSIWLKRYLR FHLAKAPEEL IEAIDSHLLD DECLAGIASH LGIDHLVRTK EFPISQESSA 120
121 DAFRALAGVF SDEKVKNLVI DFIVPQLVDI DFADIYPLAD PLAVVTDLLK SNGVTEIEPR 180
181 VLRSAGENSA EPIYVVAIYA DKLKNVGQSA GESLAIAVDM AAREALLRLW DITSEK
|
| Detection Method: | |
| Confidence: | 41.69897 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 3.36745043289731 | bayes_pls_golite062009 |
| structural molecule activity | 3.14974722428281 | bayes_pls_golite062009 |
| RNA binding | 1.99704120917168 | bayes_pls_golite062009 |
| binding | 1.51260351901676 | bayes_pls_golite062009 |
| ribonuclease activity | 1.08296225017277 | bayes_pls_golite062009 |
| nuclease activity | 0.87617073306996 | bayes_pls_golite062009 |
| endonuclease activity | 0.752043692857818 | bayes_pls_golite062009 |
| nucleic acid binding | 0.46330171850662 | bayes_pls_golite062009 |
| protein binding | 0.32114973384806 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 0.178480726843532 | bayes_pls_golite062009 |
|
Region A: Residues: [298-394] |
1 11 21 31 41 51
| | | | | |
1 VLFFGDRAAN VPLERYSQPN FSLSQKCSPG TNTNIIDHSQ PVESPDNLIE AVLRYRNVVD 60
61 AEVGKSYTKR LRHKFSRGSL AKRSFRYLVK PKPYTVA
|
| Detection Method: | |
| Confidence: | 6.045757 |
| Match: | 2yt4A |
| Description: | No description for 2yt4A was found. |
