Protein: | AGL5_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 246 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL5_ARATH.
Description | E-value | Query Range |
Subject Range |
|
225.0 | [0..1] | [246..18] |
Region A: Residues: [1-88] |
1 11 21 31 41 51 | | | | | | 1 MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60 61 VIFSTRGRLY EYANNSVRGT IERYKKAC |
Detection Method: | |
Confidence: | 18.39794 |
Match: | 1tqeP |
Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 1.0368771990474 | bayes_pls_golite062009 |
Region A: Residues: [89-246] |
1 11 21 31 41 51 | | | | | | 1 SDAVNPPTIT EANTQYYQQE ASKLRRQIRD IQNLNRHILG ESLGSLNFKE LKNLESRLEK 60 61 GISRVRSKKH EMLVAEIEYM QKREIELQND NMYLRSKITE RTGLQQQESS VIHQGTVYES 120 121 GVTSSHQSGQ YNRNYIAVNL LEPNQNSSNQ DQPPLQLV |
Detection Method: | |
Confidence: | 34.619789 |
Match: | PF01486.8 |
Description: | No description for PF01486.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.