| Protein: | AGL5_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 246 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AGL5_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..1] | [246..18] |
|
Region A: Residues: [1-88] |
1 11 21 31 41 51
| | | | | |
1 MEGGASNEVA ESSKKIGRGK IEIKRIENTT NRQVTFCKRR NGLLKKAYEL SVLCDAEVAL 60
61 VIFSTRGRLY EYANNSVRGT IERYKKAC
|
| Detection Method: |  |
| Confidence: | 18.39794 |
| Match: | 1tqeP |
| Description: | Mechanism of recruitment of class II histone deacetylases by myocyte enhancer factor-2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.0368771990474 | bayes_pls_golite062009 |
|
Region A: Residues: [89-246] |
1 11 21 31 41 51
| | | | | |
1 SDAVNPPTIT EANTQYYQQE ASKLRRQIRD IQNLNRHILG ESLGSLNFKE LKNLESRLEK 60
61 GISRVRSKKH EMLVAEIEYM QKREIELQND NMYLRSKITE RTGLQQQESS VIHQGTVYES 120
121 GVTSSHQSGQ YNRNYIAVNL LEPNQNSSNQ DQPPLQLV
|
| Detection Method: | |
| Confidence: | 34.619789 |
| Match: | PF01486.8 |
| Description: | No description for PF01486.8 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.584 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.572 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.557 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.554 | N/A | N/A | a.7.1 | Spectrin repeat |
| View | Download | 0.476 | N/A | N/A | a.2.7 | tRNA-binding arm |
