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View Structure Prediction Details

Protein: PST2_ARATH
Organism: Arabidopsis thaliana
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PST2_ARATH.

Description E-value Query
Range
Subject
Range
gi|1465366 - gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana]
137.0 [0..1] [103..1]
gi|90186625 - gi|90186625|gb|ABD91572.1| unknown [Brassica rapa]
108.0 [0..1] [103..1]
PST2_GOSHI - Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum GN=PSBT PE=4 SV=1
105.0 [0..1] [102..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMTMTATF FPAVAKVPSA TGGRRLSVVR ASTSDNTPSL EVKEQSSTTM RRDLMFTAAA  60
   61 AAVCSLAKVA MAEEEEPKRG TEAAKKKYAQ VCVTMPTAKI CRY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle