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View Structure Prediction Details

Protein: PST2_ARATH
Organism: Arabidopsis thaliana
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PST2_ARATH.

Description E-value Query
Range
Subject
Range
gi|1465366 - gi|1465366|emb|CAA66701.1| photosystem II [Arabidopsis thaliana]
137.0 [0..1] [103..1]
gi|90186625 - gi|90186625|gb|ABD91572.1| unknown [Brassica rapa]
108.0 [0..1] [103..1]
PST2_GOSHI - Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum GN=PSBT PE=4 SV=1
105.0 [0..1] [102..1]

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Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMTMTATF FPAVAKVPSA TGGRRLSVVR ASTSDNTPSL EVKEQSSTTM RRDLMFTAAA  60
   61 AAVCSLAKVA MAEEEEPKRG TEAAKKKYAQ VCVTMPTAKI CRY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.663 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.663 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.652 a.47.2 t-snare proteins
View Download 0.652 a.47.2 t-snare proteins
View Download 0.649 a.7.1 Spectrin repeat
View Download 0.639 a.24.18 Description not found.
View Download 0.632 a.47.2 t-snare proteins
View Download 0.632 a.47.2 t-snare proteins
View Download 0.626 a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
View Download 0.618 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.618 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.488 a.7.8 GAT domain
View Download 0.440 a.7.8 GAT domain
View Download 0.360 a.7.8 GAT domain
View Download 0.354 a.7.8 GAT domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle