Protein: | CSCL4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 756 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSCL4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
612.0 | [0..1] | [756..1] |
|
605.0 | [0..1] | [753..1] |
Region A: Residues: [1-193] |
1 11 21 31 41 51 | | | | | | 1 MATLTDIGVA ATINILTAFA FFIAFAILRL QPVNDRVYFP KWYLKGLRSS PIKTGGFASK 60 61 FVNLDFRSYI RFLNWMPQAL RMPEPELIDH AGLDSVVYLR IYLLGLKIFF PIACIAFTVM 120 121 VPVNWTNSTL DQLKNLTFSD IDKLSISNIP TGSSRFWVHL CMAYVITFWT CFVLQREYKH 180 181 IASMRLQFLA SEH |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [194-363] |
1 11 21 31 41 51 | | | | | | 1 RRPDQFTVLV RNIPPDPDES VSELVEHFFK VNHPDYYLTY QAVYNANKLS ELVQKRMKLQ 60 61 NWLDYYQNKH SRNPSKRPLI KIGFLGCWGE EVDAIDHYIE KIEGLTRKIS EEKETVMSST 120 121 KSLVPAAFVS FKKRWGAVVC SQTQQSRNPT EWLTEWAPEP RDIYWDNLAL |
Detection Method: | |
Confidence: | 1.15 |
Match: | 1zh5A |
Description: | Structural basis for recognition of UUUOH 3'-terminii of nascent RNA pol III transcripts by La autoantigen |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [364-546] |
1 11 21 31 41 51 | | | | | | 1 PYVQLTIRRL VIAVAFFFLT FFFMIPIAFV QTLANIEGIE KAVPFLKPLI EVKTVKSFIQ 60 61 GFLPGIALKI FLIVLPSILM LMSKFEGFIS KSSLERRCAS RYYMFQFINV FLCSIIAGTA 120 121 LQQLDSFLNQ SATEIPKTIG VSIPMKATFF ITYIMVDGWA GVAGEILRLK PLIIYHLKNF 180 181 FLV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [547-645] |
1 11 21 31 41 51 | | | | | | 1 KTEKDREEAM DPGTIGFNTG EPQIQLYFIL GLVYAAVSPI LLPFILVFFA LAYVVYRHQI 60 61 INVYNQEYES AAAFWPDVHR RVVIALIVSQ LLLMGLLST |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [646-756] |
1 11 21 31 41 51 | | | | | | 1 KKAARSTPLL FILPVLTIGF HKFCQGRYQP IFVTYPLQDA MVKDTLERMR EPNLNLKTFL 60 61 QNAYAHPVFK AADNLANEMV VEEPAPDKTP DLVATKRGSR RFNSGSAETF T |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.